Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC8.54□□□□□ -1.04
PTPRMP28827 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.54□□□□□ -1.04
PTPRMP28827 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTPRMP28827 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTPRMP28827 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PTPRMP28827 FO082842.1-201ENST00000423552 1370 ntBASIC8.54□□□□□ -1.04
PTPRMP28827 SAMM50P1-201ENST00000455403 1399 ntBASIC8.54□□□□□ -1.04
PTPRMP28827 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PTPRMP28827 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPRMP28827 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
PTPRMP28827 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPRMP28827 HSPA8P14-201ENST00000552265 1805 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPRMP28827 AL136531.3-201ENST00000624378 3658 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.53□□□□□ -1.04
PTPRMP28827 AL159987.1-201ENST00000347911 293 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 RNA5SP335-201ENST00000363817 110 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 MIR433-201ENST00000384837 93 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 AL357752.1-201ENST00000412817 349 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.53□□□□□ -1.04
PTPRMP28827 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC8.53□□□□□ -1.04
PTPRMP28827 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.53□□□□□ -1.04
PTPRMP28827 PDCL3P4-201ENST00000489621 720 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 IGHVIII-47-1-201ENST00000518187 331 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 BMPR1APS2-201ENST00000527904 1012 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.53□□□□□ -1.04
PTPRMP28827 AC000068.2-201ENST00000608816 460 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.53□□□□□ -1.04
PTPRMP28827 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.53□□□□□ -1.04
PTPRMP28827 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC8.53□□□□□ -1.04
PTPRMP28827 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPRMP28827 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PTPRMP28827 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
PTPRMP28827 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.53□□□□□ -1.04
PTPRMP28827 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPRMP28827 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPRMP28827 AP002370.1-201ENST00000528055 1602 ntBASIC8.53□□□□□ -1.04
PTPRMP28827 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PTPRMP28827 AC127070.3-201ENST00000503695 3263 ntBASIC8.52□□□□□ -1.04
PTPRMP28827 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPRMP28827 Y_RNA.126-201ENST00000363382 111 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 AC073072.2-201ENST00000447425 348 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 AC234781.3-201ENST00000452540 973 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC8.52□□□□□ -1.05
PTPRMP28827 SLC25A15P5-201ENST00000508033 253 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC8.52□□□□□ -1.05
PTPRMP28827 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.52□□□□□ -1.05
PTPRMP28827 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.52□□□□□ -1.05
PTPRMP28827 AP000919.1-201ENST00000582850 985 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 MIR4260-201ENST00000583107 67 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 AC119403.2-201ENST00000590960 598 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 AC145423.1-201ENST00000605712 336 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 AC068831.8-201ENST00000620171 435 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 AL353662.3-201ENST00000625131 237 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
PTPRMP28827 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
PTPRMP28827 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
PTPRMP28827 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPRMP28827 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.52□□□□□ -1.05
PTPRMP28827 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
PTPRMP28827 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.52□□□□□ -1.05
PTPRMP28827 AC092821.3-202ENST00000641304 2767 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
PTPRMP28827 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPRMP28827 ZNF658B-201ENST00000602828 3408 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PTPRMP28827 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
PTPRMP28827 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPRMP28827 AC008937.3-201ENST00000606813 1700 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPRMP28827 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PTPRMP28827 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8.52□□□□□ -1.05
PTPRMP28827 CASC19-281ENST00000642118 1554 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
PTPRMP28827 AL591848.4-201ENST00000567832 3472 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 CTAGE11P-201ENST00000451540 2353 ntBASIC8.52□□□□□ -1.05
PTPRMP28827 RNU1-24P-201ENST00000364285 165 ntBASIC8.51□□□□□ -1.05
PTPRMP28827 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
PTPRMP28827 AC093162.1-201ENST00000419682 124 ntBASIC8.51□□□□□ -1.05
PTPRMP28827 AC073648.4-201ENST00000442655 781 ntBASIC8.51□□□□□ -1.05
PTPRMP28827 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC8.51□□□□□ -1.05
PTPRMP28827 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.51□□□□□ -1.05
PTPRMP28827 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC8.51□□□□□ -1.05
PTPRMP28827 AC063977.5-201ENST00000601044 974 ntBASIC8.51□□□□□ -1.05
PTPRMP28827 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.51□□□□□ -1.05
PTPRMP28827 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
PTPRMP28827 AC092692.1-201ENST00000623625 2595 ntBASIC8.51□□□□□ -1.05
PTPRMP28827 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTPRMP28827 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC8.51□□□□□ -1.05
PTPRMP28827 AC002090.1-201ENST00000625000 2138 ntBASIC8.51□□□□□ -1.05
PTPRMP28827 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTPRMP28827 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
PTPRMP28827 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTPRMP28827 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
PTPRMP28827 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTPRMP28827 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
PTPRMP28827 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
PTPRMP28827 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.51□□□□□ -1.05
PTPRMP28827 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTPRMP28827 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms