Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.97□□□□□ -1.13
VARSP26640 Z80107.2-201ENST00000445127 392 ntBASIC7.97□□□□□ -1.13
VARSP26640 AC002366.1-201ENST00000446186 1190 ntBASIC7.97□□□□□ -1.13
VARSP26640 AC005002.1-201ENST00000447458 540 ntBASIC7.97□□□□□ -1.13
VARSP26640 OR13C1P-201ENST00000457612 963 ntBASIC7.97□□□□□ -1.13
VARSP26640 RPL7AP52-201ENST00000458096 790 ntBASIC7.97□□□□□ -1.13
VARSP26640 RN7SL146P-201ENST00000472338 297 ntBASIC7.97□□□□□ -1.13
VARSP26640 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.97□□□□□ -1.13
VARSP26640 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.97□□□□□ -1.13
VARSP26640 AC008802.1-201ENST00000519121 791 ntBASIC7.97□□□□□ -1.13
VARSP26640 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC7.97□□□□□ -1.13
VARSP26640 AP002748.2-201ENST00000528671 348 ntBASIC7.97□□□□□ -1.13
VARSP26640 AP005597.3-201ENST00000532369 799 ntBASIC7.97□□□□□ -1.13
VARSP26640 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.97□□□□□ -1.13
VARSP26640 VDAC2P2-201ENST00000544463 901 ntBASIC7.97□□□□□ -1.13
VARSP26640 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.97□□□□□ -1.13
VARSP26640 AC079598.4-201ENST00000549647 265 ntBASIC7.97□□□□□ -1.13
VARSP26640 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC7.97□□□□□ -1.13
VARSP26640 AC122134.1-201ENST00000565664 1104 ntBASIC7.97□□□□□ -1.13
VARSP26640 AC092133.1-201ENST00000565828 719 ntBASIC7.97□□□□□ -1.13
VARSP26640 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.97□□□□□ -1.13
VARSP26640 AC008870.2-201ENST00000568262 1024 ntBASIC7.97□□□□□ -1.13
VARSP26640 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC7.97□□□□□ -1.13
VARSP26640 JPT1-211ENST00000581874 517 ntTSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.97□□□□□ -1.13
VARSP26640 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC7.97□□□□□ -1.13
VARSP26640 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC7.97□□□□□ -1.13
VARSP26640 AC027807.2-201ENST00000616099 408 ntBASIC7.97□□□□□ -1.13
VARSP26640 AL445670.1-201ENST00000618889 801 ntBASIC7.97□□□□□ -1.13
VARSP26640 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
VARSP26640 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC7.97□□□□□ -1.13
VARSP26640 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
VARSP26640 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
VARSP26640 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
VARSP26640 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.13
VARSP26640 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.96□□□□□ -1.13
VARSP26640 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
VARSP26640 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.13
VARSP26640 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
VARSP26640 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
VARSP26640 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
VARSP26640 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
VARSP26640 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
VARSP26640 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
VARSP26640 AHCYP5-201ENST00000331585 1238 ntBASIC7.96□□□□□ -1.14
VARSP26640 RPL11P4-201ENST00000332269 436 ntBASIC7.96□□□□□ -1.14
VARSP26640 Y_RNA.144-201ENST00000363521 113 ntBASIC7.96□□□□□ -1.14
VARSP26640 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
VARSP26640 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
VARSP26640 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
VARSP26640 RNU6-738P-201ENST00000384531 106 ntBASIC7.96□□□□□ -1.14
VARSP26640 MIR606-201ENST00000384851 96 ntBASIC7.96□□□□□ -1.14
VARSP26640 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
VARSP26640 AC111200.2-201ENST00000418877 505 ntBASIC7.96□□□□□ -1.14
VARSP26640 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC7.96□□□□□ -1.14
VARSP26640 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.96□□□□□ -1.14
VARSP26640 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.96□□□□□ -1.14
VARSP26640 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.96□□□□□ -1.14
VARSP26640 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.96□□□□□ -1.14
VARSP26640 AC068137.1-201ENST00000429272 584 ntBASIC7.96□□□□□ -1.14
VARSP26640 CLUHP1-201ENST00000435012 1190 ntBASIC7.96□□□□□ -1.14
VARSP26640 ACTBP12-201ENST00000435871 418 ntBASIC7.96□□□□□ -1.14
VARSP26640 SPRYD7P1-201ENST00000443861 570 ntBASIC7.96□□□□□ -1.14
VARSP26640 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.96□□□□□ -1.14
VARSP26640 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC7.96□□□□□ -1.14
VARSP26640 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.96□□□□□ -1.14
VARSP26640 AC090589.1-201ENST00000473109 362 ntBASIC7.96□□□□□ -1.14
VARSP26640 AC107398.1-201ENST00000486904 505 ntBASIC7.96□□□□□ -1.14
VARSP26640 RN7SL135P-201ENST00000490144 278 ntBASIC7.96□□□□□ -1.14
VARSP26640 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC7.96□□□□□ -1.14
VARSP26640 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC7.96□□□□□ -1.14
VARSP26640 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC7.96□□□□□ -1.14
VARSP26640 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms