Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RPL5P25-201ENST00000441148 775 ntBASIC6.52□□□□□ -1.37
TPM1P09493 AC234771.4-201ENST00000441416 730 ntBASIC6.52□□□□□ -1.37
TPM1P09493 AC023271.1-201ENST00000445936 1090 ntBASIC6.52□□□□□ -1.37
TPM1P09493 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM1P09493 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.52□□□□□ -1.37
TPM1P09493 RNA5SP206-201ENST00000516703 121 ntBASIC6.52□□□□□ -1.37
TPM1P09493 RNA5SP75-201ENST00000516841 111 ntBASIC6.52□□□□□ -1.37
TPM1P09493 AC138832.1-201ENST00000522871 556 ntBASIC6.52□□□□□ -1.37
TPM1P09493 OR4A42P-201ENST00000531397 938 ntBASIC6.52□□□□□ -1.37
TPM1P09493 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.52□□□□□ -1.37
TPM1P09493 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.52□□□□□ -1.37
TPM1P09493 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM1P09493 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM1P09493 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TPM1P09493 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM1P09493 MIR4433B-201ENST00000581329 102 ntBASIC6.52□□□□□ -1.37
TPM1P09493 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM1P09493 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM1P09493 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.52□□□□□ -1.37
TPM1P09493 AL513327.3-201ENST00000602618 469 ntBASIC6.52□□□□□ -1.37
TPM1P09493 AL390877.1-201ENST00000605704 214 ntBASIC6.52□□□□□ -1.37
TPM1P09493 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM1P09493 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM1P09493 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TPM1P09493 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TPM1P09493 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TPM1P09493 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
TPM1P09493 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.52□□□□□ -1.37
TPM1P09493 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TPM1P09493 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TPM1P09493 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TPM1P09493 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM1P09493 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.51□□□□□ -1.37
TPM1P09493 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TPM1P09493 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM1P09493 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
TPM1P09493 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TPM1P09493 YWHAZP4-201ENST00000392459 708 ntBASIC6.51□□□□□ -1.37
TPM1P09493 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 NMD3P2-201ENST00000421815 761 ntBASIC6.51□□□□□ -1.37
TPM1P09493 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.51□□□□□ -1.37
TPM1P09493 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 AL645936.1-201ENST00000441979 518 ntBASIC6.51□□□□□ -1.37
TPM1P09493 AC016027.4-201ENST00000450866 277 ntBASIC6.51□□□□□ -1.37
TPM1P09493 SDC4P-201ENST00000453285 601 ntBASIC6.51□□□□□ -1.37
TPM1P09493 AL034369.1-201ENST00000453808 477 ntBASIC6.51□□□□□ -1.37
TPM1P09493 RARRES2P3-201ENST00000457739 473 ntBASIC6.51□□□□□ -1.37
TPM1P09493 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.51□□□□□ -1.37
TPM1P09493 AC078899.1-201ENST00000521432 1185 ntBASIC6.51□□□□□ -1.37
TPM1P09493 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.51□□□□□ -1.37
TPM1P09493 AL121594.2-201ENST00000541658 472 ntBASIC6.51□□□□□ -1.37
TPM1P09493 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.51□□□□□ -1.37
TPM1P09493 AC025283.1-201ENST00000572039 734 ntBASIC6.51□□□□□ -1.37
TPM1P09493 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM1P09493 RN7SL32P-201ENST00000580514 281 ntBASIC6.51□□□□□ -1.37
TPM1P09493 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM1P09493 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.51□□□□□ -1.37
TPM1P09493 AC241377.1-201ENST00000619797 406 ntBASIC6.51□□□□□ -1.37
TPM1P09493 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
TPM1P09493 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TPM1P09493 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
TPM1P09493 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM1P09493 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM1P09493 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM1P09493 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM1P09493 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM1P09493 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM1P09493 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM1P09493 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM1P09493 MIR138-2-201ENST00000384916 84 ntBASIC6.5□□□□□ -1.37
TPM1P09493 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM1P09493 AL096829.1-201ENST00000413677 457 ntBASIC6.5□□□□□ -1.37
TPM1P09493 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.5□□□□□ -1.37
TPM1P09493 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.5□□□□□ -1.37
TPM1P09493 OR6R1P-201ENST00000431838 940 ntBASIC6.5□□□□□ -1.37
TPM1P09493 AC094019.1-201ENST00000434678 472 ntBASIC6.5□□□□□ -1.37
TPM1P09493 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM1P09493 FRG2FP-204ENST00000453982 852 ntBASIC6.5□□□□□ -1.37
TPM1P09493 RNU1-88P-201ENST00000459274 128 ntBASIC6.5□□□□□ -1.37
TPM1P09493 AC104164.1-201ENST00000460282 590 ntBASIC6.5□□□□□ -1.37
TPM1P09493 RPS7P11-201ENST00000484240 586 ntBASIC6.5□□□□□ -1.37
TPM1P09493 RN7SL267P-201ENST00000485107 261 ntBASIC6.5□□□□□ -1.37
TPM1P09493 RPL34P33-201ENST00000486062 334 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms