Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
TPM3P06753 MIR4660-201ENST00000583549 74 ntBASIC6.63□□□□□ -1.35
TPM3P06753 NDUFB9P1-201ENST00000604683 510 ntBASIC6.63□□□□□ -1.35
TPM3P06753 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.63□□□□□ -1.35
TPM3P06753 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.63□□□□□ -1.35
TPM3P06753 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TPM3P06753 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.63□□□□□ -1.35
TPM3P06753 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.63□□□□□ -1.35
TPM3P06753 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM3P06753 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TPM3P06753 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TPM3P06753 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TPM3P06753 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TPM3P06753 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
TPM3P06753 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.62□□□□□ -1.35
TPM3P06753 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TPM3P06753 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 OR10R3P-201ENST00000361688 942 ntBASIC6.62□□□□□ -1.35
TPM3P06753 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 AL117344.1-201ENST00000407196 616 ntBASIC6.62□□□□□ -1.35
TPM3P06753 AL358178.1-201ENST00000407698 397 ntBASIC6.62□□□□□ -1.35
TPM3P06753 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM3P06753 RPS10P18-201ENST00000442662 495 ntBASIC6.62□□□□□ -1.35
TPM3P06753 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM3P06753 AL929410.2-201ENST00000451170 189 ntBASIC6.62□□□□□ -1.35
TPM3P06753 AC009567.2-201ENST00000502989 349 ntBASIC6.62□□□□□ -1.35
TPM3P06753 AC093664.1-201ENST00000511779 289 ntBASIC6.62□□□□□ -1.35
TPM3P06753 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM3P06753 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
TPM3P06753 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.62□□□□□ -1.35
TPM3P06753 AC103855.4-201ENST00000533158 265 ntBASIC6.62□□□□□ -1.35
TPM3P06753 OR9G2P-201ENST00000533326 880 ntBASIC6.62□□□□□ -1.35
TPM3P06753 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.62□□□□□ -1.35
TPM3P06753 TXNP4-201ENST00000575018 310 ntBASIC6.62□□□□□ -1.35
TPM3P06753 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
TPM3P06753 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM3P06753 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
TPM3P06753 AC068213.1-201ENST00000625124 226 ntBASIC6.62□□□□□ -1.35
TPM3P06753 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM3P06753 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM3P06753 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
TPM3P06753 AL449283.1-201ENST00000602631 3403 ntBASIC6.62□□□□□ -1.35
TPM3P06753 AC093849.1-201ENST00000563631 2209 ntBASIC6.62□□□□□ -1.35
TPM3P06753 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
TPM3P06753 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TPM3P06753 AP005432.1-201ENST00000580891 3485 ntBASIC6.62□□□□□ -1.35
TPM3P06753 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM3P06753 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.61□□□□□ -1.35
TPM3P06753 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM3P06753 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM3P06753 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM3P06753 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM3P06753 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM3P06753 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
TPM3P06753 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM3P06753 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM3P06753 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM3P06753 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM3P06753 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM3P06753 RNA5SP485-201ENST00000365053 119 ntBASIC6.61□□□□□ -1.35
TPM3P06753 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM3P06753 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM3P06753 NMD3P2-201ENST00000421815 761 ntBASIC6.61□□□□□ -1.35
TPM3P06753 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM3P06753 RPL12P18-201ENST00000437175 325 ntBASIC6.61□□□□□ -1.35
TPM3P06753 AC096632.2-201ENST00000438139 1239 ntBASIC6.61□□□□□ -1.35
TPM3P06753 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM3P06753 OR2L9P-201ENST00000444456 913 ntBASIC6.61□□□□□ -1.35
TPM3P06753 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM3P06753 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM3P06753 MORF4L2P1-201ENST00000503761 858 ntBASIC6.61□□□□□ -1.35
TPM3P06753 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.61□□□□□ -1.35
TPM3P06753 NATP-201ENST00000523491 878 ntBASIC6.61□□□□□ -1.35
TPM3P06753 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM3P06753 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.61□□□□□ -1.35
TPM3P06753 RPL41P2-201ENST00000544920 409 ntBASIC6.61□□□□□ -1.35
TPM3P06753 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM3P06753 AL359219.2-201ENST00000555184 348 ntBASIC6.61□□□□□ -1.35
TPM3P06753 AC037479.1-201ENST00000558361 625 ntBASIC6.61□□□□□ -1.35
TPM3P06753 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.61□□□□□ -1.35
TPM3P06753 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.61□□□□□ -1.35
TPM3P06753 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM3P06753 AC083964.1-201ENST00000607549 630 ntBASIC6.61□□□□□ -1.35
TPM3P06753 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM3P06753 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM3P06753 AC138965.3-201ENST00000623875 498 ntBASIC6.61□□□□□ -1.35
TPM3P06753 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
TPM3P06753 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms