Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 AL359091.1-201ENST00000449048 1734 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PDGFAP04085 OR9K2-201ENST00000305377 1122 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 RNY4P24-201ENST00000362735 96 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RNU6-185P-201ENST00000384421 107 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC008171.1-201ENST00000395058 200 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 CBX1P3-201ENST00000413296 527 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RPSAP1-201ENST00000421328 880 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC242426.1-201ENST00000435270 960 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RPS25P9-201ENST00000435591 252 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RPL7P29-201ENST00000437151 728 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC239800.1-201ENST00000442049 719 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 ARL2BPP7-201ENST00000446421 490 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 COX6CP12-201ENST00000446748 202 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AL606490.1-201ENST00000452266 765 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 AC004924.1-201ENST00000480160 781 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC122718.2-201ENST00000505325 591 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 NPM1P21-201ENST00000513394 762 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 TCP11X3P-202ENST00000514289 1254 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC116347.2-201ENST00000514912 523 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RN7SKP105-201ENST00000517192 314 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 IGJP1-201ENST00000522682 475 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 MED28P5-201ENST00000528254 438 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.24□□□□□ -1.25
PDGFAP04085 OR7K1P-201ENST00000546439 926 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.24□□□□□ -1.25
PDGFAP04085 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 PRR13P4-201ENST00000577786 421 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 SLC25A36P1-201ENST00000590111 465 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC133552.5-201ENST00000604266 540 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 MIR8089-201ENST00000620165 82 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC130448.2-201ENST00000624082 374 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PDGFAP04085 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 GTF2H2B-203ENST00000508065 1432 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 HSPD1P1-201ENST00000503199 1726 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms