Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 AL359091.1-201ENST00000449048 1734 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PDGFAP04085 OR9K2-201ENST00000305377 1122 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 RNY4P24-201ENST00000362735 96 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RNU6-185P-201ENST00000384421 107 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC008171.1-201ENST00000395058 200 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 CBX1P3-201ENST00000413296 527 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RPSAP1-201ENST00000421328 880 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC242426.1-201ENST00000435270 960 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RPS25P9-201ENST00000435591 252 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RPL7P29-201ENST00000437151 728 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC239800.1-201ENST00000442049 719 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 ARL2BPP7-201ENST00000446421 490 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 COX6CP12-201ENST00000446748 202 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AL606490.1-201ENST00000452266 765 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 AC004924.1-201ENST00000480160 781 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC122718.2-201ENST00000505325 591 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 NPM1P21-201ENST00000513394 762 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 TCP11X3P-202ENST00000514289 1254 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC116347.2-201ENST00000514912 523 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RN7SKP105-201ENST00000517192 314 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 IGJP1-201ENST00000522682 475 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 MED28P5-201ENST00000528254 438 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.24□□□□□ -1.25
PDGFAP04085 OR7K1P-201ENST00000546439 926 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.24□□□□□ -1.25
PDGFAP04085 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 PRR13P4-201ENST00000577786 421 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 SLC25A36P1-201ENST00000590111 465 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AC133552.5-201ENST00000604266 540 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 MIR8089-201ENST00000620165 82 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC130448.2-201ENST00000624082 374 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.24□□□□□ -1.25
PDGFAP04085 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PDGFAP04085 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 GTF2H2B-203ENST00000508065 1432 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PDGFAP04085 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.24□□□□□ -1.25
PDGFAP04085 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 HSPD1P1-201ENST00000503199 1726 ntBASIC7.24□□□□□ -1.25
PDGFAP04085 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDGFAP04085 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms