Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 CHCHD4P5-201ENST00000436684 427 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 ARL4AP3-201ENST00000441452 574 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 AC118469.1-201ENST00000442943 488 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AC016772.1-201ENST00000444170 1261 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 SNORA81.1-201ENST00000458922 177 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 RN7SL149P-201ENST00000465197 281 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AC091860.1-201ENST00000505723 432 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 AC146944.3-201ENST00000509969 371 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 MRPS33P3-201ENST00000513456 322 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNOT4O95628 AP000926.4-201ENST00000527351 454 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 NOP56P3-201ENST00000549457 385 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 AC024909.2-201ENST00000553035 286 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 AC090888.1-201ENST00000561335 1141 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 FAM106CP-201ENST00000582212 507 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC6.31□□□□□ -1.4
CNOT4O95628 AC004492.1-201ENST00000607036 742 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AL451049.1-201ENST00000608672 497 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 VIS1.1-201ENST00000610517 203 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.31□□□□□ -1.4
CNOT4O95628 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNOT4O95628 AC025287.2-201ENST00000621911 668 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AP000676.3-201ENST00000623299 569 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AL049541.2-201ENST00000626377 555 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.31□□□□□ -1.4
CNOT4O95628 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNOT4O95628 AC079178.2-201ENST00000439323 1624 ntBASIC6.31□□□□□ -1.4
CNOT4O95628 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNOT4O95628 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNOT4O95628 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.31□□□□□ -1.4
CNOT4O95628 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.31□□□□□ -1.4
CNOT4O95628 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNOT4O95628 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CNOT4O95628 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNOT4O95628 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CNOT4O95628 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.3□□□□□ -1.4
CNOT4O95628 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.3□□□□□ -1.4
CNOT4O95628 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CNOT4O95628 ZNF876P-202ENST00000398732 1485 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.3□□□□□ -1.4
CNOT4O95628 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CNOT4O95628 ELL2P3-201ENST00000457883 1602 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CNOT4O95628 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 RNU4-68P-201ENST00000364314 141 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CNOT4O95628 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.3□□□□□ -1.4
CNOT4O95628 AL049697.3-201ENST00000406493 982 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 RNU4-22P-201ENST00000411058 166 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.3□□□□□ -1.4
CNOT4O95628 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.3□□□□□ -1.4
CNOT4O95628 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.3□□□□□ -1.4
CNOT4O95628 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CNOT4O95628 AC234781.2-201ENST00000426370 994 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.3□□□□□ -1.4
CNOT4O95628 PSMD8P1-201ENST00000436275 769 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 NPM1P23-201ENST00000440193 849 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 AC073052.1-201ENST00000440417 714 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.3□□□□□ -1.4
CNOT4O95628 Z99127.2-201ENST00000441426 334 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 RPL21P33-201ENST00000444831 484 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 MTND2P4-201ENST00000445034 1004 ntBASIC6.3□□□□□ -1.4
CNOT4O95628 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.3□□□□□ -1.4
CNOT4O95628 SEPT7P3-201ENST00000455017 621 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms