Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 OR2L9P-201ENST00000444456 913 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 MTND2P25-201ENST00000449028 610 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AL451063.1-201ENST00000450164 1133 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM38O00635 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM38O00635 AC090543.1-201ENST00000492168 485 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM38O00635 AC083906.1-201ENST00000509298 406 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AC090568.1-201ENST00000509499 856 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 HMGN1P17-201ENST00000513734 295 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM38O00635 AP005639.1-201ENST00000526939 192 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AP004609.2-201ENST00000532177 190 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 OR4A6P-201ENST00000534364 970 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 AC134349.2-201ENST00000535136 910 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM38O00635 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM38O00635 AP003115.1-201ENST00000569849 463 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AL589863.1-201ENST00000595383 631 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AL133247.2-201ENST00000603236 482 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 RNU6-84P-201ENST00000607737 102 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM38O00635 AC022400.9-201ENST00000623633 273 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AP003499.2-201ENST00000624100 483 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AP001962.1-201ENST00000624114 559 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AL590396.2-201ENST00000636511 1041 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 AKAP17BP-201ENST00000431706 2719 ntBASIC6.42□□□□□ -1.38
TRIM38O00635 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TRIM38O00635 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM38O00635 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM38O00635 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM38O00635 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM38O00635 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM38O00635 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM38O00635 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM38O00635 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM38O00635 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM38O00635 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM38O00635 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM38O00635 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM38O00635 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM38O00635 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 AL357078.2-201ENST00000416486 427 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM38O00635 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM38O00635 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM38O00635 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM38O00635 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM38O00635 BUD31P2-201ENST00000449374 300 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 TVP23CP1-201ENST00000450317 639 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
TRIM38O00635 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM38O00635 GM2AP2-201ENST00000491764 562 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 RPL19P11-201ENST00000495944 589 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 ZNF519P4-201ENST00000514008 125 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 RNA5SP418-201ENST00000515951 117 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 SCARNA5-201ENST00000516201 276 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM38O00635 AL133399.1-201ENST00000527476 298 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 TRIM51DP-201ENST00000529746 596 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM38O00635 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM38O00635 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM38O00635 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM38O00635 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM38O00635 U1.41-201ENST00000617626 165 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM38O00635 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM38O00635 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TRIM38O00635 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM38O00635 AC007159.1-201ENST00000566529 4706 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 AL512283.1-201ENST00000606756 1384 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM38O00635 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
TRIM38O00635 DDX6P1-205ENST00000441966 1436 ntBASIC6.41□□□□□ -1.38
TRIM38O00635 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
TRIM38O00635 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM38O00635 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM38O00635 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM38O00635 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM38O00635 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM38O00635 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM38O00635 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM38O00635 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM38O00635 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM38O00635 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM38O00635 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM38O00635 MIR421-201ENST00000365696 85 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM38O00635 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM38O00635 SNORA77.2-201ENST00000408571 112 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM38O00635 AC116036.1-201ENST00000412199 367 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM38O00635 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms