Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC217777.1-201ENST00000570034 1471 ntBASIC5.82□□□□□ -1.48
PDLIM1O00151 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM1O00151 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDLIM1O00151 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 AC123912.3-201ENST00000600907 1367 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM1O00151 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM1O00151 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.81□□□□□ -1.48
PDLIM1O00151 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 RN7SKP184-201ENST00000362348 333 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 RNA5SP85-201ENST00000365378 119 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDLIM1O00151 AL391419.1-201ENST00000398901 1275 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 AL445238.1-204ENST00000400311 463 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 RNA5SP296-201ENST00000410523 111 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 RN7SKP97-201ENST00000410966 333 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 GAPDHP19-201ENST00000431768 1005 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM1O00151 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
PDLIM1O00151 NPM1P23-201ENST00000440193 849 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 RPL12P49-201ENST00000441100 121 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 AL020997.1-201ENST00000446554 349 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM1O00151 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
PDLIM1O00151 OR11I1P-201ENST00000486033 954 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 AC015524.1-201ENST00000491585 472 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM1O00151 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.81□□□□□ -1.48
PDLIM1O00151 AC111000.6-201ENST00000514471 709 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM1O00151 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM1O00151 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM1O00151 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.81□□□□□ -1.48
PDLIM1O00151 AC019257.2-201ENST00000605539 497 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 AL390877.1-201ENST00000605704 214 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 AL008582.1-201ENST00000609612 442 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 AC006924.1-201ENST00000610750 559 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 GAPDHP41-201ENST00000613707 975 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 MIR6813-201ENST00000621638 56 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 AC005618.4-201ENST00000625053 554 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM1O00151 MAPK10-350ENST00000641777 965 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM1O00151 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PDLIM1O00151 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 AC119674.1-202ENST00000641333 1860 ntBASIC5.81□□□□□ -1.48
PDLIM1O00151 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM1O00151 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDLIM1O00151 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM1O00151 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM1O00151 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM1O00151 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDLIM1O00151 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM1O00151 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM1O00151 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM1O00151 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDLIM1O00151 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM1O00151 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM1O00151 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM1O00151 IGLV3-4-201ENST00000432300 244 ntBASIC5.8□□□□□ -1.48
PDLIM1O00151 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM1O00151 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM1O00151 RN7SL188P-201ENST00000469842 285 ntBASIC5.8□□□□□ -1.48
PDLIM1O00151 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM1O00151 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM1O00151 RPL9P15-201ENST00000491096 532 ntBASIC5.8□□□□□ -1.48
PDLIM1O00151 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.8□□□□□ -1.48
PDLIM1O00151 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM1O00151 CYP4F27P-201ENST00000514557 494 ntBASIC5.8□□□□□ -1.48
PDLIM1O00151 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM1O00151 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM1O00151 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM1O00151 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM1O00151 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM1O00151 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM1O00151 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM1O00151 MIR3936-201ENST00000584304 110 ntBASIC5.8□□□□□ -1.48
PDLIM1O00151 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.8□□□□□ -1.48
PDLIM1O00151 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM1O00151 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM1O00151 AC015819.1-201ENST00000613588 663 ntBASIC5.8□□□□□ -1.48
PDLIM1O00151 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM1O00151 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM1O00151 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM1O00151 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM1O00151 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.8□□□□□ -1.48
PDLIM1O00151 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PDLIM1O00151 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM1O00151 HCFC2P1-201ENST00000392864 1592 ntBASIC5.8□□□□□ -1.48
PDLIM1O00151 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms