Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC188H7C350 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC188H7C350 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC188H7C350 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC188H7C350 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC188H7C350 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC188H7C350 RN7SKP185-201ENST00000362813 326 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC188H7C350 UBTFL2-201ENST00000411859 1191 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC188H7C350 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC188H7C350 MRPS21P2-201ENST00000424704 264 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 AL663074.2-201ENST00000440621 479 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 AC023271.1-201ENST00000445936 1090 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 AC073648.3-201ENST00000504939 925 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 AC138409.2-202ENST00000507274 458 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC188H7C350 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC188H7C350 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC188H7C350 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC188H7C350 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC188H7C350 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC188H7C350 AC124891.1-201ENST00000536322 519 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC188H7C350 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC188H7C350 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC188H7C350 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC188H7C350 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC188H7C350 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC188H7C350 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC188H7C350 NANOGP3-201ENST00000605855 286 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC188H7C350 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC188H7C350 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC188H7C350 EIF3EP1-201ENST00000433978 1316 ntBASIC6.17□□□□□ -1.42
CCDC188H7C350 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC188H7C350 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CCDC188H7C350 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC188H7C350 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC188H7C350 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
CCDC188H7C350 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CCDC188H7C350 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC188H7C350 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC188H7C350 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 AC119674.1-202ENST00000641333 1860 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CCDC188H7C350 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC188H7C350 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC188H7C350 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC188H7C350 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC188H7C350 RPL35AP31-201ENST00000418340 337 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC188H7C350 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC188H7C350 RNGTTP1-201ENST00000420965 728 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC188H7C350 ZNF619P1-201ENST00000446539 752 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 RPS23P9-201ENST00000448848 438 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC188H7C350 AC002075.1-201ENST00000457396 676 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 AC006539.1-201ENST00000481419 501 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC188H7C350 AC095052.1-201ENST00000509955 863 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 RNU6-943P-201ENST00000516960 98 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 AP004607.5-201ENST00000532034 217 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC188H7C350 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC188H7C350 AC025283.1-201ENST00000572039 734 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC188H7C350 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
CCDC188H7C350 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.16□□□□□ -1.42
CCDC188H7C350 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC188H7C350 AL589765.6-201ENST00000601909 549 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC188H7C350 MIR6503-201ENST00000622884 86 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CCDC188H7C350 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CCDC188H7C350 ADAM24P-201ENST00000398655 2101 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC188H7C350 BCORP1-203ENST00000513194 5093 ntBASIC6.16□□□□□ -1.42
CCDC188H7C350 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC188H7C350 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC188H7C350 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC188H7C350 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
CCDC188H7C350 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC188H7C350 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 AC137056.2-201ENST00000624055 1958 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms