Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC093698.1-201ENST00000423843 571 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 BTF3P10-201ENST00000433415 495 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 PPIAP17-201ENST00000438507 471 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 ARMC4P1-201ENST00000438905 707 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 RPS26P30-201ENST00000443431 335 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 GDI2P2-201ENST00000445131 608 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 DNAJC19P8-201ENST00000452887 259 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 SNORD42A-201ENST00000459584 64 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AL079303.1-201ENST00000486611 463 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC116353.1-201ENST00000489727 316 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC008638.2-201ENST00000503840 715 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 ARL2BPP6-201ENST00000512757 439 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 IGJP1-201ENST00000522682 475 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 OR4N1P-201ENST00000554847 949 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 PSMB7P1-201ENST00000556349 514 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 DNM1P33-201ENST00000565222 270 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AL354760.1-201ENST00000608357 643 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC002553.4-201ENST00000616896 331 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AL158209.2-201ENST00000619266 216 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 OR52B5P-202ENST00000641118 1110 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC131971.1-201ENST00000332881 1482 ntBASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.62□□□□□ -1.19
PCDHGA11Q9Y5H2 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC114786.1-201ENST00000512892 1415 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 RNU6-1263P-201ENST00000384601 106 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 HSD3BP5-201ENST00000434856 1132 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 RPSAP40-201ENST00000442343 891 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SL505P-201ENST00000482644 293 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC109462.1-201ENST00000491087 368 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 MTCO2P30-201ENST00000503662 364 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC111193.1-201ENST00000504097 155 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC107385.1-201ENST00000507985 778 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC025465.4-201ENST00000513422 638 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SKP2-201ENST00000517003 319 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 CDC42P3-201ENST00000518493 633 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC016954.1-201ENST00000549976 745 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC004217.3-201ENST00000551552 878 ntBASIC7.61□□□□□ -1.19
PCDHGA11Q9Y5H2 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms