Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
KCNIP3Q9Y2W7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.03□□□□□ -1.6
KCNIP3Q9Y2W7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
KCNIP3Q9Y2W7 AL353796.1-201ENST00000561542 3241 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 SNORA11D-201ENST00000408548 128 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 SNORA11E-201ENST00000408778 128 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC245096.1-201ENST00000413104 546 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 OR6C64P-201ENST00000419708 825 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 RBMY2JP-201ENST00000425544 1059 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 RPL5P25-201ENST00000441148 775 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC010240.2-201ENST00000445363 1205 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC073072.2-201ENST00000447425 348 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 SLAMF6P1-201ENST00000451067 602 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SL369P-201ENST00000477138 299 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 EIF4E2P2-201ENST00000492033 736 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC106760.2-201ENST00000504159 619 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC105420.1-201ENST00000504389 582 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC093870.1-201ENST00000506837 213 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC010287.1-201ENST00000566916 357 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF322P1-201ENST00000568013 1209 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 DPRXP4-201ENST00000578053 568 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SL311P-201ENST00000579858 306 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AP005262.1-201ENST00000582646 997 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AL137000.1-201ENST00000610528 1244 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 AC005618.4-201ENST00000625053 554 ntBASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KCNIP3Q9Y2W7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 TCP1P3-201ENST00000414406 1498 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 RNU1-49P-201ENST00000363468 159 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SKP69-201ENST00000365390 305 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AL358178.1-201ENST00000407698 397 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 RPS27AP6-201ENST00000427962 448 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC138761.5-201ENST00000433967 325 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 PHBP4-201ENST00000437447 837 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC104849.1-201ENST00000462623 405 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 RPL5P16-201ENST00000471467 790 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC023424.1-201ENST00000496058 459 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 SUMO2P4-201ENST00000504193 276 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms