Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC018638.4-201ENST00000465971 1150 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 RPL5P15-201ENST00000475870 897 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AP003467.2-201ENST00000520175 319 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC009927.2-201ENST00000520812 481 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 IGHV3-36-201ENST00000520848 401 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AP002469.1-201ENST00000526011 1043 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 ANKRD42-206ENST00000528722 954 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AP000790.1-201ENST00000528891 737 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 PCNAP4-201ENST00000532690 730 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC005632.1-201ENST00000550637 576 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 MPPE1P1-201ENST00000557286 1076 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC013452.1-201ENST00000560630 598 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 PRYP3-202ENST00000607210 444 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC009053.4-201ENST00000614366 108 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC027176.3-201ENST00000624460 586 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 ZNF734P-201ENST00000419494 1534 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC008817.1-201ENST00000504215 1562 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 NLRP9P1-201ENST00000540920 2655 ntBASIC8.47□□□□□ -1.05
VPS9D1Q9Y2B5 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 USP28-205ENST00000537706 1900 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC8.46□□□□□ -1.05
VPS9D1Q9Y2B5 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RNU6-543P-201ENST00000362576 108 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 Y_RNA.135-201ENST00000363439 95 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC092642.1-201ENST00000392417 425 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 MIR548I2-201ENST00000408348 149 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RNU6-1148P-201ENST00000410992 104 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 MRPL50P2-201ENST00000416821 482 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RPSAP8-201ENST00000429844 889 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL137792.2-201ENST00000443484 235 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC242426.2-201ENST00000446956 795 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL450023.2-201ENST00000453276 545 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RN7SL757P-201ENST00000466709 301 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL928654.1-201ENST00000476081 354 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RPL7P38-201ENST00000488396 739 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RN7SL700P-201ENST00000496982 294 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC048346.1-201ENST00000510247 144 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RNA5SP101-201ENST00000517036 108 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 SNORA25.17-201ENST00000517184 124 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC105031.1-201ENST00000518550 476 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC009902.1-201ENST00000519351 183 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RGS5-218ENST00000526176 574 ntTSL 4 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 SLC5A4P1-201ENST00000532944 612 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms