Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 AP003170.5-201ENST00000397185 335 ntBASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 OR6E1P-201ENST00000414424 923 ntBASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 RPL23AP27-201ENST00000415161 451 ntBASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 TNPO1P1-201ENST00000423641 1138 ntBASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 HMGB1P32-201ENST00000425971 565 ntBASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 AL606490.8-201ENST00000441624 319 ntBASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 DAP3-209ENST00000465375 729 ntTSL 2 BASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 OR5D15P-201ENST00000531671 942 ntBASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 AC090424.1-201ENST00000535243 736 ntBASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 AC023421.1-201ENST00000590535 1785 ntBASIC8.71□□□□□ -1.01
SHANK2Q9UPX8 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC8.71□□□□□ -1.02
SHANK2Q9UPX8 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.71□□□□□ -1.02
SHANK2Q9UPX8 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SHANK2Q9UPX8 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
SHANK2Q9UPX8 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SHANK2Q9UPX8 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SHANK2Q9UPX8 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SHANK2Q9UPX8 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SHANK2Q9UPX8 AC019205.1-201ENST00000421830 730 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 RN7SL583P-201ENST00000475692 287 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AC004453.1-201ENST00000487895 408 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 RN7SL808P-201ENST00000496066 299 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 HIGD1AP14-201ENST00000507617 282 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 MIR4260-201ENST00000583107 67 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 SRRM1P3-201ENST00000426911 2678 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AL139148.1-201ENST00000427122 680 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AC012075.1-201ENST00000436549 580 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AL390119.1-201ENST00000440329 312 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 RN7SL30P-201ENST00000488416 306 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AC105384.2-201ENST00000508433 640 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 RN7SKP288-201ENST00000516227 268 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 HMGN2P6-201ENST00000551091 273 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 CLMN-206ENST00000556441 452 ntTSL 5 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AL683813.2-201ENST00000605245 502 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AL731566.2-201ENST00000618971 317 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 AC105105.5-201ENST00000622635 1294 ntBASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
SHANK2Q9UPX8 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 DPY19L2P2-203ENST00000435536 1858 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AL592429.1-201ENST00000403909 1473 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC087516.1-201ENST00000561236 2428 ntBASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.69□□□□□ -1.02
SHANK2Q9UPX8 AC008957.3-201ENST00000624112 2242 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms