Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 VN1R6P-201ENST00000458417 907 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 RN7SL180P-201ENST00000466769 294 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 STRADBP1-201ENST00000478954 1281 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 RN7SL332P-201ENST00000482163 254 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 RN7SL849P-201ENST00000485236 295 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 RPL5P33-201ENST00000487833 905 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 RPL37P25-201ENST00000507308 276 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AL049874.4-201ENST00000557593 255 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 MIR3915-201ENST00000578518 97 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 IMMP1LP1-201ENST00000605170 488 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AL390208.1-201ENST00000605885 644 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AC009779.8-202ENST00000607990 932 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AC245389.2-201ENST00000616023 576 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AC242843.1-201ENST00000618702 573 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 RN7SKP118-201ENST00000364331 330 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 MIR7-1-201ENST00000384871 110 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AL355862.1-201ENST00000412705 353 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 RPS20P15-201ENST00000412792 311 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AL449283.1-202ENST00000418249 604 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 ELOCP9-201ENST00000418624 239 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 RPL24P2-201ENST00000421023 475 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 OR6K4P-201ENST00000423179 955 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC108059.2-201ENST00000434626 151 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC234771.3-201ENST00000454984 622 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC126615.1-201ENST00000470084 630 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AP000852.1-201ENST00000472460 573 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 RPS16P9-201ENST00000477220 427 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC093827.1-201ENST00000480094 861 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 CBX3P3-201ENST00000508108 532 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 RN7SKP5-201ENST00000517045 272 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 NPM1P6-201ENST00000521088 871 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC022146.1-201ENST00000595307 847 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC009237.13-201ENST00000603193 276 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AL390816.3-201ENST00000604527 1066 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC092354.1-201ENST00000606057 376 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC040896.1-201ENST00000613819 479 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AC090517.2-201ENST00000614966 680 ntBASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
PDZRN3Q9UPQ7 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AL603750.1-201ENST00000624216 1717 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 RNA5SP114-201ENST00000363780 113 ntBASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms