Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 PSG10P-201ENST00000501199 1500 ntBASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.72□□□□□ -1.17
CUEDC1Q9NWM3 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.71□□□□□ -1.17
CUEDC1Q9NWM3 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.71□□□□□ -1.17
CUEDC1Q9NWM3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
CUEDC1Q9NWM3 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CUEDC1Q9NWM3 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CUEDC1Q9NWM3 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.71□□□□□ -1.17
CUEDC1Q9NWM3 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CUEDC1Q9NWM3 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC7.71□□□□□ -1.17
CUEDC1Q9NWM3 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC7.71□□□□□ -1.17
CUEDC1Q9NWM3 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 RNA5SP161-201ENST00000363871 115 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 Y_RNA.356-201ENST00000365475 113 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 RPL5P5-201ENST00000392009 893 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AL121977.1-201ENST00000401636 979 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 RPS27AP11-201ENST00000402798 447 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AL079342.2-201ENST00000403367 482 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 RN7SKP56-201ENST00000410513 331 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 RNU2-5P-201ENST00000410533 180 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 CTSLP8-201ENST00000413075 967 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 TPT1P2-201ENST00000413105 503 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC093084.1-201ENST00000424233 687 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 Z98752.2-201ENST00000432727 312 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AL035458.1-201ENST00000433096 585 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 UBE2V1P3-201ENST00000439651 417 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 USP9YP15-201ENST00000442391 422 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 RPL21P33-201ENST00000444831 484 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AL157827.1-201ENST00000447622 132 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AL050341.1-201ENST00000447743 313 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC072039.1-201ENST00000477611 581 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 RN7SL416P-201ENST00000494042 298 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 HMGB1P44-201ENST00000508597 572 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AF186996.3-201ENST00000509527 964 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC010587.2-201ENST00000511727 448 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC097460.2-201ENST00000511857 741 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 LRRC34P2-201ENST00000514850 553 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 DNM1P34-202ENST00000567850 315 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC091304.5-201ENST00000568969 158 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 FAM106CP-201ENST00000582212 507 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 MIR4637-201ENST00000582405 84 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 RPL23AP77-201ENST00000588044 463 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC006967.3-201ENST00000594086 1093 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC068020.1-201ENST00000594215 661 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AP001267.4-201ENST00000602598 545 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC130352.1-201ENST00000602979 661 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 TUG1_3.1-201ENST00000616187 237 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC106782.7-201ENST00000624024 418 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC133555.5-201ENST00000624430 418 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 MIR193BHG-210ENST00000641327 515 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC099063.3-201ENST00000642066 185 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC012360.3-201ENST00000610036 3449 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 AC016831.3-201ENST00000446451 1723 ntBASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.71□□□□□ -1.18
CUEDC1Q9NWM3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms