Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC232271.1-201ENST00000602455 2715 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC093225.1-201ENST00000506867 1408 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC016739.1-201ENST00000405359 345 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 RN7SKP29-201ENST00000410957 272 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 MTATP6P19-201ENST00000413797 659 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC007679.3-201ENST00000434035 414 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 DNAJC19P5-201ENST00000443295 316 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 CFL1P4-201ENST00000451536 498 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 PPIAP27-201ENST00000453800 265 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC098847.1-201ENST00000473094 348 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AL845552.1-201ENST00000556820 323 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AL139099.4-201ENST00000614802 114 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 MIR6806-201ENST00000622141 64 ntBASIC6.28□□□□□ -1.4
SIX2Q9NPC8 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SIX2Q9NPC8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 METTL15P3-201ENST00000415522 1221 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 VN1R110P-201ENST00000438988 971 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 ATP5LP2-201ENST00000440646 311 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC023141.8-201ENST00000442554 208 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 RPL6P30-201ENST00000443382 862 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC023194.2-201ENST00000465398 406 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC105384.2-201ENST00000508433 640 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC006530.1-201ENST00000555980 571 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 CYCSP38-201ENST00000559840 322 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC009962.1-201ENST00000567327 3813 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 LINC00556-201ENST00000569603 412 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 MIR4776-2-201ENST00000580204 80 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 MIR4420-201ENST00000583944 77 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC090236.2-201ENST00000587933 1101 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC079791.1-201ENST00000605356 973 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC048341.3-201ENST00000619323 491 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 CASC19-274ENST00000642018 970 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 PARP4P2-201ENST00000446672 3326 ntBASIC6.27□□□□□ -1.41
SIX2Q9NPC8 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SIX2Q9NPC8 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SIX2Q9NPC8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms