Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 SNORD95-201ENST00000579879 68 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AL136131.3-201ENST00000607600 188 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AC027088.4-201ENST00000611559 1947 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 RNA5SP284-201ENST00000384547 118 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 U3.25-201ENST00000391209 220 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AC019205.1-201ENST00000421830 730 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 RN7SL717P-201ENST00000478343 297 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 RN7SL273P-201ENST00000481561 299 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 RN7SL214P-201ENST00000487317 265 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AC083795.1-201ENST00000491760 320 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 RNA5SP440-201ENST00000612665 119 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AL137246.2-201ENST00000613439 662 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 PARP4P2-201ENST00000446672 3326 ntBASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KIAA1549Q9HCM3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC093297.3-201ENST00000607056 2517 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 RNA5SP211-201ENST00000365516 117 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AL451046.1-201ENST00000406097 534 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC242426.1-201ENST00000435270 960 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AL445928.1-201ENST00000435545 222 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 GAPDHP48-201ENST00000436626 961 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AL512637.1-201ENST00000439523 1231 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 SEPT14P12-201ENST00000442280 560 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 NXT1P1-201ENST00000458481 316 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 RPL32P33-201ENST00000487023 394 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 TRBV5-2-201ENST00000489095 273 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC022467.1-201ENST00000614738 749 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC004836.1-201ENST00000623032 634 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC106872.5-201ENST00000508856 1416 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms