Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 VN1R20P-201ENST00000425215 966 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 RPS7P14-201ENST00000426405 583 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 NPM1P25-201ENST00000429734 854 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 DNAJC19P5-201ENST00000443295 316 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 GXYLT1P1-201ENST00000446657 490 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 MORF4-201ENST00000447135 971 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 RN7SL643P-201ENST00000471845 291 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC008628.1-201ENST00000508663 265 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC010343.2-201ENST00000510162 224 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 RNA5SP418-201ENST00000515951 117 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC005363.1-201ENST00000530779 351 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC009237.12-201ENST00000604755 742 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AL162233.1-201ENST00000620014 944 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 SAMMSON-210ENST00000641260 1308 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 SHQ1P1-201ENST00000437111 1544 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP29Q9HBJ7 AC007114.2-201ENST00000576014 4281 ntBASIC6.45□□□□□ -1.38
USP29Q9HBJ7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 MIR188-201ENST00000385034 86 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 MIR323B-201ENST00000385269 82 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC092642.1-201ENST00000392417 425 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 RNA5SP431-201ENST00000410312 120 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC245884.2-201ENST00000426257 404 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 GTF3AP6-201ENST00000432585 986 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC074367.1-201ENST00000438685 1125 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 RN7SL254P-201ENST00000460609 284 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC090589.1-201ENST00000473109 362 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 RN7SL714P-201ENST00000487050 298 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC108103.1-201ENST00000511286 446 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 IGKV2-19-201ENST00000518132 283 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 HNRNPCP1-201ENST00000556181 766 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC098483.2-201ENST00000603158 454 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 MIR6811-201ENST00000620409 58 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 MIR7159-201ENST00000620587 66 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC006249.1-201ENST00000621223 471 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC116667.2-201ENST00000641075 823 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AL049634.1-201ENST00000453770 1720 ntBASIC6.44□□□□□ -1.38
USP29Q9HBJ7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.44□□□□□ -1.38
USP29Q9HBJ7 AL137058.3-201ENST00000624531 3099 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms