Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC018717.1-201ENST00000457712 1505 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AL358913.2-201ENST00000553881 1548 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 UGT2B26P-201ENST00000508672 1613 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 AC105114.1-201ENST00000624795 1862 ntBASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM55Q9BYV6 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC125232.1-201ENST00000452554 1408 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AL022323.4-201ENST00000623980 13120 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 RNU6-1055P-201ENST00000391085 107 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 RPS27AP11-201ENST00000402798 447 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 MRPL32P1-201ENST00000406301 247 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 EEF1A1P39-201ENST00000440791 250 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 GTF2F2P2-201ENST00000445825 721 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC073476.1-201ENST00000452854 407 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 OR2AF1P-201ENST00000454899 889 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AL122001.1-201ENST00000457027 370 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 RN7SL456P-201ENST00000469290 295 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 RPL5P33-201ENST00000487833 905 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC073581.1-201ENST00000519036 575 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 EGLN3P1-201ENST00000541727 720 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 OR11H3P-201ENST00000554547 982 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 MIR4301-201ENST00000577203 66 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC061975.8-201ENST00000587058 721 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 SIGLEC31P-201ENST00000594237 551 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AL645933.2-201ENST00000606743 1207 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC092106.3-201ENST00000611308 722 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC009283.1-201ENST00000615852 645 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC108359.1-201ENST00000616451 1211 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC243725.1-201ENST00000637164 436 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 LINC01808-202ENST00000641680 1116 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 OR8A1-204ENST00000642111 1145 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 TATDN2P3-201ENST00000452855 3665 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AL357556.1-201ENST00000421884 1388 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AL391261.1-201ENST00000555712 1479 ntBASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM55Q9BYV6 AC006213.6-201ENST00000623722 4179 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AC107021.2-201ENST00000567714 2095 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 AL136531.3-201ENST00000624378 3658 ntBASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM55Q9BYV6 METTL21EP-201ENST00000298105 713 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms