Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 NPM1P23-201ENST00000440193 849 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 CCNJP1-201ENST00000450600 1149 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 NPM1P27-201ENST00000502784 830 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC021087.2-201ENST00000504656 1203 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC106800.3-201ENST00000511389 308 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC023968.1-201ENST00000560719 475 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 SYPL1P2-201ENST00000582878 727 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 MTCO3P22-201ENST00000603219 784 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC010608.3-201ENST00000625048 527 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AP003485.1-201ENST00000625093 753 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC004808.1-201ENST00000627671 721 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC135068.11-201ENST00000636378 921 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 AC099654.9-201ENST00000637055 678 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 TMEM30CP-203ENST00000637814 1035 ntBASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM54Q9BYV2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.34□□□□□ -1.4
TRIM54Q9BYV2 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
TRIM54Q9BYV2 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.34□□□□□ -1.4
TRIM54Q9BYV2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.34□□□□□ -1.4
TRIM54Q9BYV2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AC079753.1-201ENST00000623243 3868 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 UGT2B24P-201ENST00000514441 1597 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 RNA5SP308-201ENST00000362532 115 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 SNORA70.9-201ENST00000384370 135 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 RPL10P10-201ENST00000403509 664 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AC116036.1-201ENST00000412199 367 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 CDY17P-201ENST00000414121 1282 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AL139184.1-202ENST00000422303 222 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AC073310.1-201ENST00000423226 1033 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 CDY8P-201ENST00000428380 1279 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AC234771.4-201ENST00000441416 730 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AL606517.1-201ENST00000446914 387 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 CDY20P-201ENST00000447528 1279 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 SNX18P26-201ENST00000458433 740 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 RPSAP37-201ENST00000470913 821 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 RN7SL165P-201ENST00000477476 291 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 MTCO3P27-201ENST00000514397 196 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 IGKV1D-22-201ENST00000518953 324 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AP001804.1-201ENST00000526868 919 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AC084851.2-201ENST00000530377 364 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 CD24P2-201ENST00000565486 219 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AL158211.1-201ENST00000566763 763 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AC036176.3-201ENST00000602456 418 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AP000864.1-201ENST00000609424 650 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AC015722.2-201ENST00000622210 551 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms