Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL078621.3-201ENST00000623707 2042 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 RN7SKP74-201ENST00000362849 309 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 RNU1-84P-201ENST00000365447 164 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 RN7SKP221-201ENST00000410420 301 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC024937.2-201ENST00000411669 1242 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AL354707.3-201ENST00000427308 331 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 CENPN-204ENST00000428963 971 ntTSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AL136231.1-201ENST00000429407 730 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC099670.2-201ENST00000435130 321 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 EMC3-AS1-205ENST00000438698 534 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AL121578.2-201ENST00000448797 447 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC073594.1-201ENST00000462065 364 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 RN7SL643P-201ENST00000471845 291 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 RN7SL369P-201ENST00000477138 299 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 SUMO2P4-201ENST00000504193 276 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 RNU6-513P-201ENST00000516104 104 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC092865.1-201ENST00000544395 1023 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC026956.1-201ENST00000558741 396 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 DPRXP4-201ENST00000578053 568 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 MIR4258-201ENST00000580920 91 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 MIR4660-201ENST00000583549 74 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC073046.2-201ENST00000604756 527 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC139792.1-201ENST00000607051 647 ntBASIC4.47□□□□□ -1.69
AP1S3Q96PC3 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.47□□□□□ -1.69
AP1S3Q96PC3 QRSL1P3-201ENST00000552666 1316 ntBASIC4.46□□□□□ -1.69
AP1S3Q96PC3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.46□□□□□ -1.69
AP1S3Q96PC3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
AP1S3Q96PC3 ICE2P1-201ENST00000512800 1849 ntBASIC4.46□□□□□ -1.69
AP1S3Q96PC3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
AP1S3Q96PC3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
AP1S3Q96PC3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
AP1S3Q96PC3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 AC104623.2-202ENST00000623477 4002 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 RN7SKP128-201ENST00000364270 303 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 RNA5SP296-201ENST00000410523 111 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 NMD3P2-201ENST00000421815 761 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 PTPN2P1-201ENST00000423212 1072 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 AC092106.1-201ENST00000444291 373 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 RPL23AP60-201ENST00000450011 454 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 RN7SL197P-201ENST00000466981 299 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 RN7SL326P-201ENST00000477493 296 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 AC079080.1-201ENST00000479841 822 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 AC093816.1-201ENST00000515076 913 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 snoU109.5-201ENST00000516231 132 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 IGKV1D-32-201ENST00000517449 318 ntBASIC4.46□□□□□ -1.7
AP1S3Q96PC3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.46□□□□□ -1.7
AP1S3Q96PC3 TPM3P3-201ENST00000521343 354 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms