Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AP005435.3-201ENST00000531260 3198 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 NPM1P23-201ENST00000440193 849 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 COL11A2P1-205ENST00000441798 676 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC063955.1-201ENST00000462872 685 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 AL035690.1-201ENST00000490892 383 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 NPM1P28-201ENST00000492269 840 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 OR52A4P-203ENST00000498233 1014 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC097486.1-201ENST00000515331 210 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 TRAV11-201ENST00000539512 339 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC133552.4-201ENST00000576103 676 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 GLYATL1P2-202ENST00000588046 902 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC004805.3-201ENST00000603178 310 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC027334.1-201ENST00000603257 310 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC091167.5-201ENST00000605689 894 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC006924.1-201ENST00000610750 559 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 RNA5SP439-201ENST00000617595 124 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 HDAC1P2-201ENST00000453661 1398 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 PPBPP2-201ENST00000513150 1362 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 AC125238.2-201ENST00000430003 1440 ntBASIC5.64□□□□□ -1.51
PTP4A1Q93096 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.64□□□□□ -1.51
PTP4A1Q93096 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC093775.1-201ENST00000624154 1868 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 GNG5P2-201ENST00000372054 207 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 GLUD1P9-201ENST00000420997 1173 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC093084.1-201ENST00000424233 687 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AL354707.3-201ENST00000427308 331 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 BUD31P2-201ENST00000449374 300 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 PPIAP32-201ENST00000449940 472 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 RPL7L1P3-201ENST00000455249 689 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 HSPE1P22-201ENST00000456856 327 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AL445687.2-201ENST00000458156 728 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC114324.2-202ENST00000503812 134 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC010343.2-201ENST00000510162 224 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC113191.1-201ENST00000517759 403 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC008429.4-201ENST00000521201 182 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AL133399.1-201ENST00000527476 298 ntBASIC5.63□□□□□ -1.51
PTP4A1Q93096 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.63□□□□□ -1.51
PTP4A1Q93096 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms