Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 KCTD9P4-201ENST00000526766 1166 ntBASIC9.62□□□□□ -0.87
TOPBP1Q92547 RBM22P1-201ENST00000578589 1214 ntBASIC9.62□□□□□ -0.87
TOPBP1Q92547 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 AC025574.2-201ENST00000615621 514 ntBASIC9.62□□□□□ -0.87
TOPBP1Q92547 AL731566.2-201ENST00000618971 317 ntBASIC9.62□□□□□ -0.87
TOPBP1Q92547 AC090527.3-201ENST00000619041 548 ntBASIC9.62□□□□□ -0.87
TOPBP1Q92547 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOPBP1Q92547 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOPBP1Q92547 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOPBP1Q92547 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 CYB5AP4-201ENST00000396692 399 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 DUTP5-201ENST00000406790 469 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AC015977.1-201ENST00000418887 292 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AL133325.1-201ENST00000421090 382 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 VDAC1P2-201ENST00000423609 850 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 NMNAT1P5-201ENST00000559657 841 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AC106730.2-201ENST00000566641 540 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
TOPBP1Q92547 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TOPBP1Q92547 MFSD8-219ENST00000641228 2559 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TOPBP1Q92547 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TOPBP1Q92547 U3.36-201ENST00000408418 213 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 GSTA7P-201ENST00000438425 448 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AL162739.1-201ENST00000450606 307 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 RN7SL165P-201ENST00000477476 291 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AC074255.1-201ENST00000511259 501 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AL671862.1-201ENST00000515851 349 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 AC018552.1-201ENST00000562099 811 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TOPBP1Q92547 MIR4480-201ENST00000582492 71 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TOPBP1Q92547 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC9.61□□□□□ -0.87
TOPBP1Q92547 MFSD8-216ENST00000641147 4009 ntBASIC9.61□□□□□ -0.87
TOPBP1Q92547 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC9.6□□□□□ -0.87
TOPBP1Q92547 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC9.6□□□□□ -0.87
TOPBP1Q92547 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC9.6□□□□□ -0.87
TOPBP1Q92547 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 TNPO1P2-201ENST00000426249 2665 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC9.6□□□□□ -0.87
TOPBP1Q92547 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 RPS6P23-201ENST00000413224 722 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 GYG1P1-201ENST00000460864 698 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC9.6□□□□□ -0.87
TOPBP1Q92547 RN7SL346P-201ENST00000491561 294 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 CEACAMP10-202ENST00000495431 496 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 AC105233.1-201ENST00000498840 781 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 AP004607.2-201ENST00000533949 322 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 TCL6_3.1-201ENST00000619064 137 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 CTAGE11P-201ENST00000451540 2353 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 AC130304.1-201ENST00000622942 2385 ntBASIC9.6□□□□□ -0.87
TOPBP1Q92547 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC9.6□□□□□ -0.87
TOPBP1Q92547 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TOPBP1Q92547 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC9.6□□□□□ -0.87
TOPBP1Q92547 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
TOPBP1Q92547 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
TOPBP1Q92547 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
TOPBP1Q92547 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC9.59□□□□□ -0.87
TOPBP1Q92547 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
TOPBP1Q92547 BX322650.1-201ENST00000332359 2143 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
TOPBP1Q92547 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TOPBP1Q92547 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC9.59□□□□□ -0.87
TOPBP1Q92547 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
TOPBP1Q92547 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TOPBP1Q92547 RNA5SP87-201ENST00000384155 118 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 MIR640-201ENST00000385086 96 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 RBMY2QP-201ENST00000429799 1147 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC9.59□□□□□ -0.87
TOPBP1Q92547 ACA64.4-201ENST00000459070 127 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 AC109462.1-201ENST00000491087 368 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 RN7SL447P-201ENST00000494711 245 ntBASIC9.59□□□□□ -0.87
TOPBP1Q92547 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms