Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC087752.2-201ENST00000521219 281 ntBASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC093524.1-201ENST00000564266 1094 ntBASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AP000676.3-201ENST00000623299 569 ntBASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AL449283.1-201ENST00000602631 3403 ntBASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 AL359715.4-201ENST00000606629 1436 ntBASIC6.67□□□□□ -1.34
TRIM48Q8IWZ4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC104837.1-201ENST00000444644 1587 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 RNU6-1214P-201ENST00000363650 109 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 MIR640-201ENST00000385086 96 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 NPM1P37-201ENST00000403105 874 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AL589794.1-201ENST00000424971 390 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AL160175.1-201ENST00000428124 247 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 USP9YP14-201ENST00000430663 563 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 NDUFA5P10-201ENST00000432147 357 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 FABP5P2-201ENST00000439042 408 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 RPL7AP71-201ENST00000451120 739 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AL034369.1-201ENST00000453808 477 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC026254.2-201ENST00000475295 371 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 RN7SL187P-201ENST00000495587 303 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 OR4A21P-201ENST00000532759 944 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AL133507.1-201ENST00000605269 557 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AL158042.1-201ENST00000605338 460 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC048341.3-201ENST00000619323 491 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 MIR6813-201ENST00000621638 56 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AP002782.1-201ENST00000623107 614 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 AC019080.5-201ENST00000624891 757 ntBASIC6.66□□□□□ -1.34
TRIM48Q8IWZ4 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms