Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC130365.2-201ENST00000525882 1201 ntBASIC5.72□□□□□ -1.49
RTL4Q6ZR62 AP001858.2-201ENST00000536213 601 ntBASIC5.72□□□□□ -1.49
RTL4Q6ZR62 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 AC007346.1-201ENST00000569208 867 ntBASIC5.72□□□□□ -1.49
RTL4Q6ZR62 GLYATL1P2-202ENST00000588046 902 ntBASIC5.72□□□□□ -1.49
RTL4Q6ZR62 AC079315.1-201ENST00000602952 623 ntBASIC5.72□□□□□ -1.49
RTL4Q6ZR62 AC091167.5-201ENST00000605689 894 ntBASIC5.72□□□□□ -1.49
RTL4Q6ZR62 AP001437.1-201ENST00000608783 456 ntBASIC5.72□□□□□ -1.49
RTL4Q6ZR62 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 AC005725.1-201ENST00000577346 2607 ntBASIC5.72□□□□□ -1.49
RTL4Q6ZR62 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RTL4Q6ZR62 LINC02019-201ENST00000608605 2060 ntBASIC5.71□□□□□ -1.49
RTL4Q6ZR62 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RTL4Q6ZR62 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AL133243.2-201ENST00000610331 1621 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 COX6B1P3-201ENST00000312310 260 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 OR7E156P-201ENST00000400303 464 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AL445238.1-204ENST00000400311 463 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 PNKDP1-201ENST00000435914 430 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 RBMY2AP-201ENST00000445405 1157 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 RBMY2CP-201ENST00000448575 1157 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 RBMY2DP-202ENST00000448881 1157 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 RBMY2BP-202ENST00000451071 1156 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 PPIAP7-201ENST00000454070 489 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 Z83838.1-202ENST00000456225 839 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 snoU13.29-201ENST00000459370 104 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC068228.1-201ENST00000461723 211 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 OR7E99P-201ENST00000505750 922 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 PRMT5P1-201ENST00000514351 598 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 Y_RNA.710-201ENST00000516975 110 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AP000620.1-201ENST00000527147 504 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC092332.1-201ENST00000563684 829 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 MIR3189-201ENST00000578735 73 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 MIR6778-201ENST00000617912 73 ntBASIC5.71□□□□□ -1.5
RTL4Q6ZR62 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.71□□□□□ -1.5
RTL4Q6ZR62 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 AC097063.1-201ENST00000426714 1797 ntBASIC5.7□□□□□ -1.5
RTL4Q6ZR62 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 AC096921.2-201ENST00000561507 1916 ntBASIC5.7□□□□□ -1.5
RTL4Q6ZR62 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 AC068870.3-201ENST00000625077 2536 ntBASIC5.7□□□□□ -1.5
RTL4Q6ZR62 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 RPL23AP17-201ENST00000401064 499 ntBASIC5.7□□□□□ -1.5
RTL4Q6ZR62 RN7SKP151-201ENST00000410230 316 ntBASIC5.7□□□□□ -1.5
RTL4Q6ZR62 RNA5SP156-201ENST00000410250 110 ntBASIC5.7□□□□□ -1.5
RTL4Q6ZR62 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.7□□□□□ -1.5
RTL4Q6ZR62 MRPS21P2-201ENST00000424704 264 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms