Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RNA5SP400-201ENST00000517155 111 ntBASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AL136228.1-201ENST00000622221 319 ntBASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AL357562.1-201ENST00000624911 609 ntBASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3CQ6NXT2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
H3F3CQ6NXT2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
H3F3CQ6NXT2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.65□□□□□ -1.51
H3F3CQ6NXT2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.65□□□□□ -1.51
H3F3CQ6NXT2 AC006213.6-201ENST00000623722 4179 ntBASIC5.65□□□□□ -1.51
H3F3CQ6NXT2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
H3F3CQ6NXT2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
H3F3CQ6NXT2 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 LYPLA1P3-201ENST00000402650 695 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 RPS15AP30-201ENST00000420976 390 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 RPS29P14-201ENST00000431518 171 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 GAPDHP75-201ENST00000433910 943 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AL512593.1-201ENST00000444758 779 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 RPS27AP3-201ENST00000453803 454 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AC090589.1-201ENST00000473109 362 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 RN7SL193P-201ENST00000491708 276 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 UGT2A3P7-201ENST00000510485 734 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AC083837.1-201ENST00000565297 2994 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AC023389.2-201ENST00000580031 955 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 MIR6809-201ENST00000612189 116 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 MIR6793-201ENST00000612376 63 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AC096708.4-201ENST00000620563 552 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 HDAC1P2-201ENST00000453661 1398 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AP001541.1-201ENST00000623322 1904 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 AC011815.2-201ENST00000618230 2021 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 PSG10P-201ENST00000501199 1500 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.64□□□□□ -1.51
H3F3CQ6NXT2 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 RN7SKP269-201ENST00000365545 319 ntBASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 RN7SKP161-201ENST00000411110 305 ntBASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 RPL35AP3-201ENST00000414680 288 ntBASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 BX284632.2-201ENST00000421091 399 ntBASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 AL022237.1-201ENST00000446663 358 ntBASIC5.63□□□□□ -1.51
H3F3CQ6NXT2 RPL23AP60-201ENST00000450011 454 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms