Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AL589647.1-201ENST00000402485 466 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AL731534.1-201ENST00000434711 269 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AL450996.1-201ENST00000445574 1202 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AL603882.1-201ENST00000463059 681 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 RPSAP50-201ENST00000481955 852 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC099521.1-201ENST00000482557 334 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 PGAM1P13-201ENST00000507497 754 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 OR11J2P-201ENST00000555298 907 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 MRPS21P7-201ENST00000566937 238 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC015720.2-201ENST00000567709 334 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 RN7SL708P-201ENST00000580952 299 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 CYCSP1-201ENST00000604815 315 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 AC116651.1-201ENST00000609724 556 ntBASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
CDC42BPAQ5VT25 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 RMRPP5-201ENST00000411156 267 ntBASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 AL390774.1-201ENST00000411924 246 ntBASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 RPL7AP6-201ENST00000477943 801 ntBASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 RN7SL30P-201ENST00000488416 306 ntBASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 AC004825.1-201ENST00000555068 586 ntBASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 AC137695.1-201ENST00000604126 489 ntBASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
CDC42BPAQ5VT25 AC131649.2-201ENST00000624925 4439 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AC007562.1-201ENST00000421819 517 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AC023274.2-201ENST00000445264 521 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 CT45A11P-201ENST00000448043 1134 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 EIF1P7-201ENST00000487533 337 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AC067852.5-201ENST00000589299 310 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 MIR6837-201ENST00000620884 64 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AC132068.1-201ENST00000623805 459 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AC022034.1-201ENST00000512867 2156 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 CDC123-202ENST00000378900 933 ntTSL 5 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 RN7SKP216-201ENST00000411050 312 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 NIPA2P1-201ENST00000426223 976 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 IGLV3-24-201ENST00000517477 197 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 OR5D15P-201ENST00000531671 942 ntBASIC8.66□□□□□ -1.02
CDC42BPAQ5VT25 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42BPAQ5VT25 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42BPAQ5VT25 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42BPAQ5VT25 AL139805.2-201ENST00000455305 2433 ntBASIC8.65□□□□□ -1.02
CDC42BPAQ5VT25 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
CDC42BPAQ5VT25 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms