Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC109486.1-201ENST00000486833 374 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 SSX8-201ENST00000506270 579 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC008496.1-201ENST00000509131 295 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH1Q08174 UGT2A3P7-201ENST00000510485 734 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 OR7E83P-201ENST00000511021 970 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 OR4R3P-201ENST00000525084 838 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC037479.1-201ENST00000558361 625 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH1Q08174 BMS1P8-201ENST00000565049 1178 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 EIF4A3P1-201ENST00000578499 647 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.16□□□□□ -1.26
PCDH1Q08174 RN7SL25P-201ENST00000583862 260 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 OR4G1P-201ENST00000588632 938 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AP001542.2-201ENST00000593141 364 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC068790.7-201ENST00000602347 528 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AL356055.1-201ENST00000602528 446 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 NDUFA8P1-201ENST00000605525 367 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC135050.6-202ENST00000613584 392 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 FRG1HP-204ENST00000617940 757 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDH1Q08174 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
PCDH1Q08174 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDH1Q08174 HDAC1P1-201ENST00000455482 1445 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 AC123769.2-201ENST00000624332 5984 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AL136981.1-203ENST00000451452 3844 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDH1Q08174 SOCS5P5-201ENST00000402732 1586 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 AC104162.1-201ENST00000430831 2382 ntBASIC7.16□□□□□ -1.26
PCDH1Q08174 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDH1Q08174 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
PCDH1Q08174 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PCDH1Q08174 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH1Q08174 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
PCDH1Q08174 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDH1Q08174 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH1Q08174 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDH1Q08174 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH1Q08174 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH1Q08174 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDH1Q08174 AC008171.1-201ENST00000395058 200 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 IFNA12P-201ENST00000413147 571 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDH1Q08174 AL357632.1-201ENST00000426688 643 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH1Q08174 CNOT7P1-201ENST00000429006 852 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.15□□□□□ -1.26
PCDH1Q08174 MORF4L1P5-201ENST00000433352 961 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH1Q08174 AC092170.1-201ENST00000440211 356 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PCDH1Q08174 AL137845.2-201ENST00000444292 988 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 AC023512.1-201ENST00000444513 499 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDH1Q08174 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDH1Q08174 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
PCDH1Q08174 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDH1Q08174 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 AC091959.2-201ENST00000477363 321 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 NCOR1P1-202ENST00000486162 291 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDH1Q08174 RPL37P25-201ENST00000507308 276 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDH1Q08174 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDH1Q08174 AC008837.2-201ENST00000513076 418 ntBASIC7.15□□□□□ -1.26
PCDH1Q08174 AC138866.1-201ENST00000514522 497 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms