Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.42□□□□□ -1.22
SOX4Q06945 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX4Q06945 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.42□□□□□ -1.22
SOX4Q06945 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX4Q06945 ULK4P1-202ENST00000565174 503 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AC024267.2-201ENST00000582737 417 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX4Q06945 AC020914.7-201ENST00000594477 545 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AC016877.3-201ENST00000606778 504 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 AC092653.1-201ENST00000608509 531 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AC105227.2-201ENST00000615075 605 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 AC124312.6-202ENST00000623624 418 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 OR8G3P-202ENST00000641572 1255 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 AL139805.2-201ENST00000455305 2433 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX4Q06945 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SOX4Q06945 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX4Q06945 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 AP002364.1-201ENST00000623330 3386 ntBASIC7.42□□□□□ -1.22
SOX4Q06945 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SOX4Q06945 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX4Q06945 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX4Q06945 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SOX4Q06945 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX4Q06945 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX4Q06945 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
SOX4Q06945 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SOX4Q06945 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 SNORA70G-201ENST00000383923 142 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SOX4Q06945 Y_RNA.578-201ENST00000390903 88 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.41□□□□□ -1.22
SOX4Q06945 AL590084.1-201ENST00000407885 387 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 RN7SKP205-201ENST00000410999 307 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 RN7SKP263-201ENST00000411194 309 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 AL663109.1-201ENST00000411498 844 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 AC244452.1-201ENST00000413798 141 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 RPL23AP85-201ENST00000421838 433 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 TNPO1P1-201ENST00000423641 1138 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 MTND4P28-201ENST00000426217 387 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX4Q06945 AL365220.1-201ENST00000432923 399 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX4Q06945 AL591503.2-201ENST00000442314 1005 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 HMGB3P6-201ENST00000444896 598 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 GAPDHP16-201ENST00000448152 962 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 NPM1P9-201ENST00000453156 844 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 SNRPCP11-201ENST00000492453 205 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 RN7SL569P-201ENST00000494652 288 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX4Q06945 AC092349.1-201ENST00000504903 310 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 AC133963.2-201ENST00000513686 578 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 RNA5SP278-201ENST00000517055 102 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX4Q06945 NPM1P52-201ENST00000518264 846 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX4Q06945 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC7.41□□□□□ -1.22
SOX4Q06945 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.41□□□□□ -1.22
SOX4Q06945 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX4Q06945 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX4Q06945 ELOCP32-201ENST00000548625 324 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.41□□□□□ -1.22
SOX4Q06945 AC106734.1-201ENST00000568646 663 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 EIF1P4-201ENST00000572664 335 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX4Q06945 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.41□□□□□ -1.22
SOX4Q06945 AC107982.3-201ENST00000584957 985 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX4Q06945 AC106791.2-201ENST00000604680 391 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 LARP7P1-201ENST00000605576 316 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 AL445423.1-201ENST00000609941 536 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.41□□□□□ -1.22
SOX4Q06945 AL596275.2-203ENST00000641951 371 ntBASIC7.41□□□□□ -1.22
SOX4Q06945 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SOX4Q06945 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SOX4Q06945 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms