Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RN7SL741P-201ENST00000482473 289 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 OR7E99P-201ENST00000505750 922 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 MAST4-IT1-201ENST00000514241 658 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AP000620.1-201ENST00000527147 504 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC090424.1-201ENST00000535243 736 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC023310.2-201ENST00000553844 547 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 DPPA3P2-202ENST00000557188 1219 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC007346.1-201ENST00000569208 867 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC092681.3-201ENST00000609463 678 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AL352984.2-202ENST00000613699 155 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AL591926.1-201ENST00000620542 217 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 AL683826.1-201ENST00000624104 627 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 AL357140.4-201ENST00000636827 412 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCS1Q01581 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCS1Q01581 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 AC138907.8-201ENST00000623981 2256 ntBASIC5.71□□□□□ -1.5
HMGCS1Q01581 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCS1Q01581 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS1Q01581 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS1Q01581 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS1Q01581 OR2W4P-201ENST00000406496 926 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC099677.3-201ENST00000427081 395 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 RPSAP65-201ENST00000429660 595 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 HSPE1P27-201ENST00000430808 296 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 RPS12P17-201ENST00000438591 377 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 KRT8P51-201ENST00000438938 274 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 AL663074.2-201ENST00000440621 479 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 RPS7P3-201ENST00000443360 580 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC093166.3-201ENST00000448785 303 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS1Q01581 HMGB1P7-201ENST00000450921 612 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC104339.1-201ENST00000465478 348 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC021006.1-201ENST00000489849 553 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC008629.2-201ENST00000503783 483 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC122718.2-201ENST00000505325 591 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 ST13P12-201ENST00000508958 1094 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC024405.1-201ENST00000532521 1042 ntBASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
HMGCS1Q01581 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS1Q01581 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS1Q01581 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS1Q01581 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS1Q01581 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 PSG10P-201ENST00000501199 1500 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS1Q01581 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS1Q01581 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS1Q01581 RN7SKP128-201ENST00000364270 303 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AL353662.1-201ENST00000439099 327 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AC019084.1-201ENST00000457337 432 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 RN7SL168P-201ENST00000463821 279 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AC079080.1-201ENST00000479841 822 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 AC093719.1-201ENST00000480427 441 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS1Q01581 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCS1Q01581 HSD3BP3-201ENST00000514706 994 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 MIR2117-201ENST00000516780 80 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 AC078899.1-201ENST00000521432 1185 ntBASIC5.69□□□□□ -1.5
HMGCS1Q01581 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms