Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NKX6-1P78426 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NKX6-1P78426 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NKX6-1P78426 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NKX6-1P78426 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.05□□□□□ -1.44
NKX6-1P78426 AL121949.2-201ENST00000403446 1548 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AL132640.2-201ENST00000559968 1698 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 AC117409.1-201ENST00000470499 1310 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 TPTE2P2-201ENST00000403471 1466 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.04□□□□□ -1.44
NKX6-1P78426 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
NKX6-1P78426 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.04□□□□□ -1.44
NKX6-1P78426 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.04□□□□□ -1.44
NKX6-1P78426 RNU4-31P-201ENST00000384211 141 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 AL359715.1-201ENST00000404330 555 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 MIR1282-201ENST00000408865 101 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 AL590806.1-201ENST00000415818 853 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AC008753.1-201ENST00000423096 284 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AL390879.1-201ENST00000439143 386 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
NKX6-1P78426 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.04□□□□□ -1.44
NKX6-1P78426 EIF2S2P2-201ENST00000447161 982 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 Z95152.1-201ENST00000453556 656 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 SNORD11.1-201ENST00000459482 85 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 RN7SL83P-201ENST00000468131 297 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 AC005412.2-201ENST00000492004 341 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 RPL37P23-201ENST00000492641 294 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.04□□□□□ -1.44
NKX6-1P78426 RPL5P11-201ENST00000498068 893 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.04□□□□□ -1.44
NKX6-1P78426 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 IGLVV-66-201ENST00000523818 341 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.04□□□□□ -1.44
NKX6-1P78426 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.04□□□□□ -1.44
NKX6-1P78426 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AL132640.1-201ENST00000559594 619 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.04□□□□□ -1.44
NKX6-1P78426 ACTG1P15-201ENST00000570019 1063 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 MIR4732-201ENST00000581873 76 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 RPL7AP69-201ENST00000595306 806 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 RPS4XP21-201ENST00000603814 750 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 AC093424.1-201ENST00000604999 338 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 AC012557.1-201ENST00000607115 611 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 AC009464.1-201ENST00000615731 469 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 MIR6861-201ENST00000618657 64 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 MIR6806-201ENST00000622141 64 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.04□□□□□ -1.44
NKX6-1P78426 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.04□□□□□ -1.44
NKX6-1P78426 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AC095038.1-201ENST00000429248 1591 ntBASIC6.04□□□□□ -1.44
NKX6-1P78426 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.04□□□□□ -1.44
NKX6-1P78426 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NKX6-1P78426 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.04□□□□□ -1.44
NKX6-1P78426 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX6-1P78426 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
NKX6-1P78426 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX6-1P78426 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX6-1P78426 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX6-1P78426 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NKX6-1P78426 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NKX6-1P78426 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.03□□□□□ -1.44
NKX6-1P78426 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NKX6-1P78426 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.03□□□□□ -1.44
NKX6-1P78426 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX6-1P78426 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX6-1P78426 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX6-1P78426 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NKX6-1P78426 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.03□□□□□ -1.44
NKX6-1P78426 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms