Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ACTBP60709 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ACTBP60709 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.2□□□□□ -1.58
ACTBP60709 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ACTBP60709 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.2□□□□□ -1.58
ACTBP60709 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTBP60709 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTBP60709 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
ACTBP60709 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 AP000473.2-201ENST00000602659 1537 ntBASIC5.2□□□□□ -1.58
ACTBP60709 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ACTBP60709 RN7SKP77-201ENST00000363261 353 ntBASIC5.2□□□□□ -1.58
ACTBP60709 SNORD94-201ENST00000386037 137 ntBASIC5.2□□□□□ -1.58
ACTBP60709 ARSFP1-201ENST00000398758 477 ntBASIC5.2□□□□□ -1.58
ACTBP60709 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.2□□□□□ -1.58
ACTBP60709 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 COL11A2P1-205ENST00000441798 676 ntBASIC5.2□□□□□ -1.58
ACTBP60709 AP003385.3-201ENST00000472498 287 ntBASIC5.2□□□□□ -1.58
ACTBP60709 PDCL3P4-201ENST00000489621 720 ntBASIC5.2□□□□□ -1.58
ACTBP60709 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 HMGN1P26-201ENST00000558737 303 ntBASIC5.2□□□□□ -1.58
ACTBP60709 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.2□□□□□ -1.58
ACTBP60709 AC024267.2-201ENST00000582737 417 ntBASIC5.2□□□□□ -1.58
ACTBP60709 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTBP60709 AC022001.1-201ENST00000605193 268 ntBASIC5.2□□□□□ -1.58
ACTBP60709 AL390877.1-201ENST00000605704 214 ntBASIC5.2□□□□□ -1.58
ACTBP60709 AC068213.1-201ENST00000625124 226 ntBASIC5.2□□□□□ -1.58
ACTBP60709 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTBP60709 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
ACTBP60709 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ACTBP60709 CDC27P2-201ENST00000425026 1922 ntBASIC5.2□□□□□ -1.58
ACTBP60709 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.2□□□□□ -1.58
ACTBP60709 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.2□□□□□ -1.58
ACTBP60709 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTBP60709 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
ACTBP60709 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ACTBP60709 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ACTBP60709 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
ACTBP60709 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ACTBP60709 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.19□□□□□ -1.58
ACTBP60709 MAPK10-338ENST00000641647 3362 ntBASIC5.19□□□□□ -1.58
ACTBP60709 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ACTBP60709 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
ACTBP60709 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.19□□□□□ -1.58
ACTBP60709 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ACTBP60709 SNORD35A-201ENST00000363389 86 ntBASIC5.19□□□□□ -1.58
ACTBP60709 AL033519.1-201ENST00000407266 307 ntBASIC5.19□□□□□ -1.58
ACTBP60709 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.19□□□□□ -1.58
ACTBP60709 AC245096.1-201ENST00000413104 546 ntBASIC5.19□□□□□ -1.58
ACTBP60709 PTCD2P2-201ENST00000415579 1095 ntBASIC5.19□□□□□ -1.58
ACTBP60709 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.19□□□□□ -1.58
ACTBP60709 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.19□□□□□ -1.58
ACTBP60709 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.19□□□□□ -1.58
ACTBP60709 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.19□□□□□ -1.58
ACTBP60709 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.19□□□□□ -1.58
ACTBP60709 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.19□□□□□ -1.58
ACTBP60709 AL645939.3-201ENST00000435408 225 ntBASIC5.19□□□□□ -1.58
ACTBP60709 AL020997.1-201ENST00000446554 349 ntBASIC5.19□□□□□ -1.58
ACTBP60709 RSU1P1-201ENST00000453416 441 ntBASIC5.19□□□□□ -1.58
ACTBP60709 RN7SL552P-201ENST00000462094 276 ntBASIC5.19□□□□□ -1.58
ACTBP60709 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.19□□□□□ -1.58
ACTBP60709 AC090602.1-201ENST00000469695 252 ntBASIC5.19□□□□□ -1.58
ACTBP60709 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.19□□□□□ -1.58
ACTBP60709 RN7SL413P-201ENST00000482700 297 ntBASIC5.19□□□□□ -1.58
ACTBP60709 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.19□□□□□ -1.58
ACTBP60709 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.19□□□□□ -1.58
ACTBP60709 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
ACTBP60709 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.19□□□□□ -1.58
ACTBP60709 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.19□□□□□ -1.58
ACTBP60709 RPL3P13-201ENST00000550415 216 ntBASIC5.19□□□□□ -1.58
ACTBP60709 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.19□□□□□ -1.58
ACTBP60709 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.19□□□□□ -1.58
ACTBP60709 AC005332.4-201ENST00000592752 579 ntBASIC5.19□□□□□ -1.58
ACTBP60709 SNORA74.4-201ENST00000607595 199 ntBASIC5.19□□□□□ -1.58
ACTBP60709 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ACTBP60709 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.19□□□□□ -1.58
ACTBP60709 AL122125.1-201ENST00000616999 600 ntBASIC5.19□□□□□ -1.58
ACTBP60709 AC005618.4-201ENST00000625053 554 ntBASIC5.19□□□□□ -1.58
ACTBP60709 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ACTBP60709 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.19□□□□□ -1.58
ACTBP60709 THAP12P9-201ENST00000503971 2360 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms