Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
NR1H2P55055 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 AC132825.1-201ENST00000463573 2247 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.07□□□□□ -1.44
NR1H2P55055 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
NR1H2P55055 SPATA2P1-201ENST00000431223 2055 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NR1H2P55055 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.06□□□□□ -1.44
NR1H2P55055 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NR1H2P55055 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NR1H2P55055 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NR1H2P55055 MIR133A2-201ENST00000347538 102 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 RNA5SP382-201ENST00000363355 112 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 RNA5SP152-201ENST00000365184 110 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NR1H2P55055 AC245036.1-201ENST00000391727 309 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
NR1H2P55055 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.06□□□□□ -1.44
NR1H2P55055 AHCYP8-201ENST00000425108 209 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.06□□□□□ -1.44
NR1H2P55055 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.06□□□□□ -1.44
NR1H2P55055 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.06□□□□□ -1.44
NR1H2P55055 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 GAPDHP20-201ENST00000444107 1007 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 OR13K1P-201ENST00000444577 975 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 AL022237.1-201ENST00000446663 358 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 AC083806.1-201ENST00000468934 316 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 LARP7P4-201ENST00000481075 878 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 AC116917.1-201ENST00000520558 305 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
NR1H2P55055 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.06□□□□□ -1.44
NR1H2P55055 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.06□□□□□ -1.44
NR1H2P55055 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.06□□□□□ -1.44
NR1H2P55055 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.06□□□□□ -1.44
NR1H2P55055 AC106785.4-201ENST00000569492 412 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 EIF4A3P1-201ENST00000578499 647 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.06□□□□□ -1.44
NR1H2P55055 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 AL583832.1-201ENST00000603227 784 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.06□□□□□ -1.44
NR1H2P55055 AC004241.2-201ENST00000614562 444 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 AC211486.4-201ENST00000621495 113 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
NR1H2P55055 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NR1H2P55055 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NR1H2P55055 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NR1H2P55055 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.06□□□□□ -1.44
NR1H2P55055 AC095038.1-201ENST00000429248 1591 ntBASIC6.06□□□□□ -1.44
NR1H2P55055 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NR1H2P55055 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.05□□□□□ -1.44
NR1H2P55055 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
NR1H2P55055 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
NR1H2P55055 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NR1H2P55055 AC007342.5-201ENST00000571340 2142 ntBASIC6.05□□□□□ -1.44
NR1H2P55055 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NR1H2P55055 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NR1H2P55055 KYNUP3-201ENST00000574386 1341 ntBASIC6.05□□□□□ -1.44
NR1H2P55055 AC092451.3-201ENST00000625067 1343 ntBASIC6.05□□□□□ -1.44
NR1H2P55055 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NR1H2P55055 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
NR1H2P55055 RACGAP1P-201ENST00000550663 1879 ntBASIC6.05□□□□□ -1.44
NR1H2P55055 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NR1H2P55055 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NR1H2P55055 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NR1H2P55055 RN7SKP191-201ENST00000364713 306 ntBASIC6.05□□□□□ -1.44
NR1H2P55055 RN7SKP186-201ENST00000365371 303 ntBASIC6.05□□□□□ -1.44
NR1H2P55055 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NR1H2P55055 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NR1H2P55055 SNORA40.4-201ENST00000390971 128 ntBASIC6.05□□□□□ -1.44
NR1H2P55055 AC019178.1-201ENST00000392337 440 ntBASIC6.05□□□□□ -1.44
NR1H2P55055 SETP10-201ENST00000424368 814 ntBASIC6.05□□□□□ -1.44
NR1H2P55055 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.05□□□□□ -1.44
NR1H2P55055 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.05□□□□□ -1.44
NR1H2P55055 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.05□□□□□ -1.44
NR1H2P55055 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.05□□□□□ -1.44
NR1H2P55055 OR6R1P-201ENST00000431838 940 ntBASIC6.05□□□□□ -1.44
NR1H2P55055 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NR1H2P55055 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms