Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGCS2P54868 AC016583.1-201ENST00000624221 2431 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGCS2P54868 RN7SKP124-201ENST00000364730 341 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 AL391422.1-201ENST00000402155 436 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.85□□□□□ -1.31
HMGCS2P54868 AL451136.1-201ENST00000435399 325 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 CYCSP51-201ENST00000443545 318 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 AC011742.2-201ENST00000443818 352 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.85□□□□□ -1.31
HMGCS2P54868 AL133445.1-201ENST00000467051 452 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
HMGCS2P54868 RPS17P15-201ENST00000475609 349 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 RN7SL184P-201ENST00000488308 297 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 OR7E157P-201ENST00000494376 911 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 RNA5SP34-201ENST00000516887 130 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.85□□□□□ -1.31
HMGCS2P54868 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.85□□□□□ -1.31
HMGCS2P54868 GARSP1-201ENST00000570895 719 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 AC020765.1-201ENST00000604296 328 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 AC145423.1-201ENST00000605712 336 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGCS2P54868 TCL6_3.1-201ENST00000619064 137 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGCS2P54868 AC087269.2-201ENST00000641764 975 ntBASIC6.85□□□□□ -1.31
HMGCS2P54868 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HMGCS2P54868 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HMGCS2P54868 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGCS2P54868 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGCS2P54868 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGCS2P54868 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGCS2P54868 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGCS2P54868 AC097634.1-201ENST00000604491 2467 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGCS2P54868 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HMGCS2P54868 RNA5SP333-201ENST00000363466 118 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 RNA5SP334-201ENST00000364825 118 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 NME1P1-201ENST00000420914 382 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 TNPO1P1-201ENST00000423641 1138 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGCS2P54868 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.84□□□□□ -1.31
HMGCS2P54868 AC012075.1-201ENST00000436549 580 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 RPS12P17-201ENST00000438591 377 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.84□□□□□ -1.31
HMGCS2P54868 CCDC11P1-201ENST00000503137 1162 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.84□□□□□ -1.31
HMGCS2P54868 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.84□□□□□ -1.31
HMGCS2P54868 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 KCTD9P4-201ENST00000526766 1166 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 AL049872.1-201ENST00000556323 322 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGCS2P54868 OR4H6P-201ENST00000563771 921 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 AC211433.2-201ENST00000608433 387 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 AC008115.3-201ENST00000614874 549 ntBASIC6.84□□□□□ -1.31
HMGCS2P54868 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGCS2P54868 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGCS2P54868 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGCS2P54868 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HMGCS2P54868 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
HMGCS2P54868 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HMGCS2P54868 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
HMGCS2P54868 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
HMGCS2P54868 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.84□□□□□ -1.32
HMGCS2P54868 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HMGCS2P54868 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HMGCS2P54868 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
HMGCS2P54868 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
HMGCS2P54868 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGCS2P54868 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 AC008957.3-201ENST00000624112 2242 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGCS2P54868 RNA5SP211-201ENST00000365516 117 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 RN7SKP59-201ENST00000410520 314 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGCS2P54868 DEFA9P-201ENST00000433042 285 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 FMO7P-201ENST00000436045 768 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGCS2P54868 AC026254.2-201ENST00000475295 371 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 AC008410.1-201ENST00000483777 339 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGCS2P54868 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGCS2P54868 OR7E158P-201ENST00000524483 910 ntBASIC6.83□□□□□ -1.32
HMGCS2P54868 IGBP1P1-201ENST00000554337 1009 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms