Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.98□□□□□ -1.29
EPHB3P54753 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
EPHB3P54753 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 AC099654.3-201ENST00000447087 1546 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.98□□□□□ -1.29
EPHB3P54753 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 AC096992.2-201ENST00000609553 1684 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
EPHB3P54753 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.98□□□□□ -1.29
EPHB3P54753 RNU1-65P-201ENST00000363919 148 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 RNA5SP512-201ENST00000364550 120 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
EPHB3P54753 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 AJ239321.1-201ENST00000424255 564 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AL139415.1-201ENST00000424862 352 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 MTCYBP29-201ENST00000436327 1006 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 UBE2D3P1-201ENST00000436669 444 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 ARMC4P1-201ENST00000438905 707 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 HSFY3P-201ENST00000444242 1191 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC093166.3-201ENST00000448785 303 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC6.98□□□□□ -1.29
EPHB3P54753 SULT1D1P-201ENST00000458020 882 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 EIF1P7-201ENST00000487533 337 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 HMGB1P38-201ENST00000490557 577 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.98□□□□□ -1.29
EPHB3P54753 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.98□□□□□ -1.29
EPHB3P54753 AC008427.1-201ENST00000503102 655 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC113367.2-201ENST00000505749 160 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 AC093755.1-201ENST00000512950 1023 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 Vault.2-201ENST00000516519 98 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC091163.3-201ENST00000518269 1144 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.98□□□□□ -1.29
EPHB3P54753 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.98□□□□□ -1.29
EPHB3P54753 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.98□□□□□ -1.29
EPHB3P54753 RPL3P13-201ENST00000550415 216 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC6.98□□□□□ -1.29
EPHB3P54753 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.98□□□□□ -1.29
EPHB3P54753 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.98□□□□□ -1.29
EPHB3P54753 AC090888.1-201ENST00000561335 1141 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.98□□□□□ -1.29
EPHB3P54753 SNORA70D-201ENST00000578836 135 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 AL353778.1-201ENST00000603149 408 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 MRPS35P3-201ENST00000603189 709 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC107952.2-201ENST00000606048 486 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC245297.2-201ENST00000610119 565 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.98□□□□□ -1.29
EPHB3P54753 LINC00216-201ENST00000623548 1126 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 AC092192.1-201ENST00000633154 1018 ntBASIC6.98□□□□□ -1.29
EPHB3P54753 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
EPHB3P54753 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
EPHB3P54753 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
EPHB3P54753 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
EPHB3P54753 RPL12P13-201ENST00000310055 497 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.97□□□□□ -1.29
EPHB3P54753 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.97□□□□□ -1.29
EPHB3P54753 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 YWHAZP4-201ENST00000392459 708 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.97□□□□□ -1.29
EPHB3P54753 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 AC245452.2-201ENST00000435222 392 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 AL513321.1-201ENST00000441175 761 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms