Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
LIMK1P53667 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LIMK1P53667 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIMK1P53667 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LIMK1P53667 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LIMK1P53667 OR2M1P-201ENST00000318104 951 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 OR9K1P-201ENST00000326513 941 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
LIMK1P53667 RNA5SP110-201ENST00000362638 115 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 SNORA70.9-201ENST00000384370 135 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AL035696.2-201ENST00000407941 709 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 OR3A2-201ENST00000408891 1076 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.25□□□□□ -1.41
LIMK1P53667 AC007394.1-201ENST00000421941 531 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AL157884.1-201ENST00000424561 454 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.25□□□□□ -1.41
LIMK1P53667 MGAT2P2-201ENST00000427194 797 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 FTLP19-201ENST00000433300 394 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AC023141.3-201ENST00000436698 278 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.25□□□□□ -1.41
LIMK1P53667 AP006222.1-205ENST00000450734 457 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.25□□□□□ -1.41
LIMK1P53667 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.25□□□□□ -1.41
LIMK1P53667 RN7SL369P-201ENST00000477138 299 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AL133372.1-201ENST00000493565 745 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AP000926.3-201ENST00000497201 299 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AC231760.1-201ENST00000498002 260 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 SCARNA18.1-201ENST00000516330 83 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AC122713.1-201ENST00000518368 1015 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AC112191.2-201ENST00000522428 333 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.25□□□□□ -1.41
LIMK1P53667 OR7A11P-201ENST00000597719 953 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AP001823.1-201ENST00000604056 1003 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AL445647.2-201ENST00000615170 130 ntBASIC6.25□□□□□ -1.41
LIMK1P53667 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.25□□□□□ -1.41
LIMK1P53667 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.25□□□□□ -1.41
LIMK1P53667 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LIMK1P53667 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIMK1P53667 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.25□□□□□ -1.41
LIMK1P53667 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIMK1P53667 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LIMK1P53667 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.25□□□□□ -1.41
LIMK1P53667 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LIMK1P53667 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.25□□□□□ -1.41
LIMK1P53667 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
LIMK1P53667 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
LIMK1P53667 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
LIMK1P53667 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 AL353743.3-201ENST00000442109 1468 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 AC005225.5-201ENST00000623547 2225 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LIMK1P53667 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 U3.43-201ENST00000410734 213 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 RNU2-22P-201ENST00000411266 212 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.24□□□□□ -1.41
LIMK1P53667 AL035660.1-201ENST00000422041 222 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.24□□□□□ -1.41
LIMK1P53667 AP000281.1-201ENST00000444036 316 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.24□□□□□ -1.41
LIMK1P53667 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.24□□□□□ -1.41
LIMK1P53667 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.24□□□□□ -1.41
LIMK1P53667 RN7SL515P-201ENST00000463999 297 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 AC026782.2-201ENST00000510845 636 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.24□□□□□ -1.41
LIMK1P53667 RNA5SP362-201ENST00000516048 118 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.24□□□□□ -1.41
LIMK1P53667 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.24□□□□□ -1.41
LIMK1P53667 AC084033.1-201ENST00000550830 633 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.24□□□□□ -1.41
LIMK1P53667 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.24□□□□□ -1.41
LIMK1P53667 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.24□□□□□ -1.41
LIMK1P53667 AL359704.2-201ENST00000604335 521 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.24□□□□□ -1.41
LIMK1P53667 AP000864.1-201ENST00000609424 650 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 AC016769.4-201ENST00000616893 535 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 AL512652.1-201ENST00000619006 500 ntBASIC6.24□□□□□ -1.41
LIMK1P53667 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LIMK1P53667 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.24□□□□□ -1.41
LIMK1P53667 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LIMK1P53667 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 AC096992.2-201ENST00000609553 1684 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.23□□□□□ -1.41
LIMK1P53667 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.23□□□□□ -1.41
LIMK1P53667 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.23□□□□□ -1.41
LIMK1P53667 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
LIMK1P53667 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms