Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC021678.3-201ENST00000517893 476 ntBASIC10.31□□□□□ -0.76
SMARCA2P51531 AP004607.2-201ENST00000533949 322 ntBASIC10.31□□□□□ -0.76
SMARCA2P51531 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC10.31□□□□□ -0.76
SMARCA2P51531 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC10.31□□□□□ -0.76
SMARCA2P51531 AC000068.2-201ENST00000608816 460 ntBASIC10.31□□□□□ -0.76
SMARCA2P51531 SAMMSON-209ENST00000641222 1100 ntBASIC10.31□□□□□ -0.76
SMARCA2P51531 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SMARCA2P51531 CTAGE11P-201ENST00000451540 2353 ntBASIC10.3□□□□□ -0.76
SMARCA2P51531 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC10.3□□□□□ -0.76
SMARCA2P51531 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SMARCA2P51531 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
SMARCA2P51531 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SMARCA2P51531 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC10.3□□□□□ -0.76
SMARCA2P51531 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SMARCA2P51531 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
SMARCA2P51531 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC10.3□□□□□ -0.76
SMARCA2P51531 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC10.3□□□□□ -0.76
SMARCA2P51531 RPS23P9-201ENST00000448848 438 ntBASIC10.3□□□□□ -0.76
SMARCA2P51531 RPL7P45-201ENST00000455851 743 ntBASIC10.3□□□□□ -0.76
SMARCA2P51531 AC004129.2-201ENST00000457229 287 ntBASIC10.3□□□□□ -0.76
SMARCA2P51531 RPL23AP40-201ENST00000487630 390 ntBASIC10.3□□□□□ -0.76
SMARCA2P51531 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC10.3□□□□□ -0.76
SMARCA2P51531 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC10.3□□□□□ -0.76
SMARCA2P51531 AL355974.3-201ENST00000617383 467 ntBASIC10.3□□□□□ -0.76
SMARCA2P51531 TCL6_3.1-201ENST00000619064 137 ntBASIC10.3□□□□□ -0.76
SMARCA2P51531 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC10.3□□□□□ -0.76
SMARCA2P51531 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SMARCA2P51531 COL6A4P1-202ENST00000487147 4317 ntBASIC10.3□□□□□ -0.76
SMARCA2P51531 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
SMARCA2P51531 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC10.29□□□□□ -0.76
SMARCA2P51531 ATM-215ENST00000530958 5718 ntTSL 2 BASIC10.29□□□□□ -0.76
SMARCA2P51531 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SMARCA2P51531 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SMARCA2P51531 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC10.29□□□□□ -0.76
SMARCA2P51531 CEACAMP10-202ENST00000495431 496 ntBASIC10.29□□□□□ -0.76
SMARCA2P51531 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC10.29□□□□□ -0.76
SMARCA2P51531 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC10.29□□□□□ -0.76
SMARCA2P51531 AP001922.4-201ENST00000526967 290 ntBASIC10.29□□□□□ -0.76
SMARCA2P51531 AC007494.1-201ENST00000562293 760 ntBASIC10.29□□□□□ -0.76
SMARCA2P51531 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC10.29□□□□□ -0.76
SMARCA2P51531 AC132068.1-201ENST00000623805 459 ntBASIC10.29□□□□□ -0.76
SMARCA2P51531 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC10.29□□□□□ -0.76
SMARCA2P51531 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC10.29□□□□□ -0.76
SMARCA2P51531 AOX3P-204ENST00000491025 2107 ntBASIC10.29□□□□□ -0.76
SMARCA2P51531 AC011504.1-201ENST00000623331 4103 ntBASIC10.29□□□□□ -0.76
SMARCA2P51531 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SMARCA2P51531 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
SMARCA2P51531 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA2P51531 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA2P51531 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA2P51531 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA2P51531 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA2P51531 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SMARCA2P51531 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA2P51531 AP000547.1-201ENST00000454360 617 ntBASIC10.28□□□□□ -0.76
SMARCA2P51531 AC073581.1-201ENST00000519036 575 ntBASIC10.28□□□□□ -0.76
SMARCA2P51531 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC10.28□□□□□ -0.76
SMARCA2P51531 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC10.28□□□□□ -0.76
SMARCA2P51531 AF230666.2-201ENST00000602328 725 ntBASIC10.28□□□□□ -0.76
SMARCA2P51531 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC10.28□□□□□ -0.76
SMARCA2P51531 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA2P51531 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA2P51531 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SMARCA2P51531 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
SMARCA2P51531 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
SMARCA2P51531 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.76
SMARCA2P51531 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SMARCA2P51531 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC10.27□□□□□ -0.76
SMARCA2P51531 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
SMARCA2P51531 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SMARCA2P51531 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC10.27□□□□□ -0.76
SMARCA2P51531 OR6D1P-201ENST00000436165 939 ntBASIC10.27□□□□□ -0.76
SMARCA2P51531 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SMARCA2P51531 RPS11P7-201ENST00000442125 465 ntBASIC10.27□□□□□ -0.76
SMARCA2P51531 CEACAMP7-201ENST00000444105 496 ntBASIC10.27□□□□□ -0.76
SMARCA2P51531 EIF4EBP2P1-201ENST00000450009 343 ntBASIC10.27□□□□□ -0.76
SMARCA2P51531 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC10.27□□□□□ -0.76
SMARCA2P51531 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC10.27□□□□□ -0.76
SMARCA2P51531 AC126615.2-201ENST00000553003 515 ntBASIC10.27□□□□□ -0.76
SMARCA2P51531 AL512310.9-201ENST00000553311 948 ntBASIC10.27□□□□□ -0.76
SMARCA2P51531 RPL10P14-201ENST00000565265 298 ntBASIC10.27□□□□□ -0.76
SMARCA2P51531 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC10.27□□□□□ -0.76
SMARCA2P51531 AP002505.2-201ENST00000623585 696 ntBASIC10.27□□□□□ -0.76
SMARCA2P51531 AC131971.1-201ENST00000332881 1482 ntBASIC10.27□□□□□ -0.76
SMARCA2P51531 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SMARCA2P51531 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
SMARCA2P51531 AL133243.4-201ENST00000623116 3109 ntBASIC10.27□□□□□ -0.77
SMARCA2P51531 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC10.27□□□□□ -0.77
SMARCA2P51531 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms