Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SDC4P-201ENST00000453285 601 ntBASIC6.36□□□□□ -1.39
LHX1P48742 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.36□□□□□ -1.39
LHX1P48742 RPL12P24-201ENST00000474907 486 ntBASIC6.36□□□□□ -1.39
LHX1P48742 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
LHX1P48742 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LHX1P48742 AC006499.4-201ENST00000510947 694 ntBASIC6.36□□□□□ -1.39
LHX1P48742 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.36□□□□□ -1.39
LHX1P48742 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LHX1P48742 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
LHX1P48742 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.36□□□□□ -1.39
LHX1P48742 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.36□□□□□ -1.39
LHX1P48742 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.36□□□□□ -1.39
LHX1P48742 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.36□□□□□ -1.39
LHX1P48742 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.36□□□□□ -1.39
LHX1P48742 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.36□□□□□ -1.39
LHX1P48742 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.36□□□□□ -1.39
LHX1P48742 SNORA11.6-201ENST00000619030 128 ntBASIC6.36□□□□□ -1.39
LHX1P48742 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.36□□□□□ -1.39
LHX1P48742 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LHX1P48742 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
LHX1P48742 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
LHX1P48742 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.36□□□□□ -1.39
LHX1P48742 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LHX1P48742 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
LHX1P48742 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
LHX1P48742 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.35□□□□□ -1.39
LHX1P48742 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
LHX1P48742 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
LHX1P48742 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.35□□□□□ -1.39
LHX1P48742 AC099677.3-201ENST00000427081 395 ntBASIC6.35□□□□□ -1.39
LHX1P48742 AL731534.1-201ENST00000434711 269 ntBASIC6.35□□□□□ -1.39
LHX1P48742 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LHX1P48742 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 AL162739.1-201ENST00000450606 307 ntBASIC6.35□□□□□ -1.39
LHX1P48742 FTH1P8-201ENST00000498161 514 ntBASIC6.35□□□□□ -1.39
LHX1P48742 AC008945.1-201ENST00000505144 499 ntBASIC6.35□□□□□ -1.39
LHX1P48742 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.35□□□□□ -1.39
LHX1P48742 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.35□□□□□ -1.39
LHX1P48742 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.35□□□□□ -1.39
LHX1P48742 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.35□□□□□ -1.39
LHX1P48742 COX6CP7-201ENST00000597056 208 ntBASIC6.35□□□□□ -1.39
LHX1P48742 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.35□□□□□ -1.39
LHX1P48742 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.35□□□□□ -1.39
LHX1P48742 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.35□□□□□ -1.39
LHX1P48742 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LHX1P48742 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.34□□□□□ -1.39
LHX1P48742 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.34□□□□□ -1.39
LHX1P48742 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
LHX1P48742 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LHX1P48742 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.34□□□□□ -1.39
LHX1P48742 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LHX1P48742 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LHX1P48742 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LHX1P48742 AL355377.1-201ENST00000621125 1653 ntBASIC6.34□□□□□ -1.39
LHX1P48742 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LHX1P48742 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
LHX1P48742 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
LHX1P48742 TMSB4XP2-201ENST00000335179 210 ntBASIC6.34□□□□□ -1.39
LHX1P48742 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
LHX1P48742 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
LHX1P48742 LYPLA1P3-201ENST00000402650 695 ntBASIC6.34□□□□□ -1.39
LHX1P48742 AL354890.1-201ENST00000413730 346 ntBASIC6.34□□□□□ -1.39
LHX1P48742 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 RPS3P2-201ENST00000421346 701 ntBASIC6.34□□□□□ -1.39
LHX1P48742 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.34□□□□□ -1.39
LHX1P48742 IPPKP1-201ENST00000422501 768 ntBASIC6.34□□□□□ -1.39
LHX1P48742 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LHX1P48742 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.34□□□□□ -1.39
LHX1P48742 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.34□□□□□ -1.39
LHX1P48742 CUBNP2-201ENST00000443534 1139 ntBASIC6.34□□□□□ -1.39
LHX1P48742 MTCO3P17-201ENST00000443775 513 ntBASIC6.34□□□□□ -1.39
LHX1P48742 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LHX1P48742 ACA64.4-201ENST00000459070 127 ntBASIC6.34□□□□□ -1.39
LHX1P48742 AC011476.1-201ENST00000466725 307 ntBASIC6.34□□□□□ -1.39
LHX1P48742 GAPDHP71-201ENST00000511530 1003 ntBASIC6.34□□□□□ -1.39
LHX1P48742 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.34□□□□□ -1.39
LHX1P48742 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.34□□□□□ -1.39
LHX1P48742 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.34□□□□□ -1.39
LHX1P48742 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.34□□□□□ -1.39
LHX1P48742 AL356801.1-201ENST00000559320 294 ntBASIC6.34□□□□□ -1.39
LHX1P48742 AC092121.1-201ENST00000569452 202 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms