Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AL022311.1-201ENST00000623726 19416 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 AC092701.1-201ENST00000623627 1551 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
NKX2-1P43699 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NKX2-1P43699 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX2-1P43699 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-1P43699 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX2-1P43699 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-1P43699 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX2-1P43699 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NKX2-1P43699 AL359091.1-201ENST00000449048 1734 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.07□□□□□ -1.6
NKX2-1P43699 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 RN7SKP130-201ENST00000364924 301 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 SNORD65-201ENST00000391079 73 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 RANP6-201ENST00000413691 644 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 MICG-208ENST00000416822 132 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 PTP4A1P1-201ENST00000420539 515 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-1P43699 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-1P43699 AC000089.1-201ENST00000424559 801 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 RNF19BPX-201ENST00000426224 625 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 AL354707.3-201ENST00000427308 331 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-1P43699 MTND4P15-201ENST00000437913 1033 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-1P43699 KRT8P51-201ENST00000438938 274 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX2-1P43699 MTCO3P43-201ENST00000440974 771 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-1P43699 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.07□□□□□ -1.6
NKX2-1P43699 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-1P43699 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-1P43699 EIF2S2P4-201ENST00000461070 984 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 AC104629.2-201ENST00000468627 598 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
NKX2-1P43699 RN7SL868P-201ENST00000485915 303 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-1P43699 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.07□□□□□ -1.6
NKX2-1P43699 SUMO2P4-201ENST00000504193 276 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-1P43699 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 CARSP2-201ENST00000520688 277 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 AC136777.2-201ENST00000522979 358 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NKX2-1P43699 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-1P43699 OR6M2P-201ENST00000529831 871 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-1P43699 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX2-1P43699 NDUFB9P1-201ENST00000604683 510 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 SNORD96A-201ENST00000606577 79 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-1P43699 MIR7159-201ENST00000620587 66 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 AL163152.1-201ENST00000642001 374 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX2-1P43699 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NKX2-1P43699 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX2-1P43699 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX2-1P43699 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NKX2-1P43699 AL592429.1-201ENST00000403909 1473 ntBASIC5.07□□□□□ -1.6
NKX2-1P43699 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 AC107021.2-201ENST00000567714 2095 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX2-1P43699 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.06□□□□□ -1.6
NKX2-1P43699 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NKX2-1P43699 CDC27P2-201ENST00000425026 1922 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 RNA5SP355-201ENST00000365317 135 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms