Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL355488.2-201ENST00000609909 2850 ntBASIC6.21□□□□□ -1.41
SLC1A1P43005 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SLC1A1P43005 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.21□□□□□ -1.41
SLC1A1P43005 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SLC1A1P43005 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SLC1A1P43005 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
SLC1A1P43005 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SLC1A1P43005 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC1A1P43005 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC1A1P43005 RN7SKP279-201ENST00000411383 298 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC1A1P43005 AL035422.1-201ENST00000414193 397 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC1A1P43005 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.21□□□□□ -1.42
SLC1A1P43005 RPS14P4-201ENST00000415880 418 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC1A1P43005 AL445928.1-201ENST00000435545 222 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC1A1P43005 AC092865.4-201ENST00000477936 615 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 RN7SL362P-201ENST00000494228 267 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC1A1P43005 HMGN1P17-201ENST00000513734 295 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 MIR2117-201ENST00000516780 80 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.21□□□□□ -1.42
SLC1A1P43005 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC1A1P43005 AC126615.2-201ENST00000553003 515 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.21□□□□□ -1.42
SLC1A1P43005 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC1A1P43005 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC1A1P43005 MRPS21P8-201ENST00000569196 235 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.21□□□□□ -1.42
SLC1A1P43005 RN7SL230P-201ENST00000580835 303 ntBASIC6.21□□□□□ -1.42
SLC1A1P43005 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.21□□□□□ -1.42
SLC1A1P43005 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.21□□□□□ -1.42
SLC1A1P43005 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.21□□□□□ -1.42
SLC1A1P43005 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC1A1P43005 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC1A1P43005 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC1A1P43005 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SLC1A1P43005 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SLC1A1P43005 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 AC232271.1-201ENST00000602455 2715 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SLC1A1P43005 AC012254.3-201ENST00000591183 2117 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.2□□□□□ -1.42
SLC1A1P43005 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
SLC1A1P43005 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SLC1A1P43005 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
SLC1A1P43005 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.2□□□□□ -1.42
SLC1A1P43005 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 U3.10-201ENST00000364459 214 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SLC1A1P43005 RN7SKP146-201ENST00000410242 334 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 RPL5P10-201ENST00000445207 894 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 AL445466.1-201ENST00000448432 357 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 PPIAP7-201ENST00000454070 489 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.2□□□□□ -1.42
SLC1A1P43005 AC005017.1-201ENST00000482002 490 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 AC008629.2-201ENST00000503783 483 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 GUSBP9-201ENST00000510138 584 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.2□□□□□ -1.42
SLC1A1P43005 AC136777.2-201ENST00000522979 358 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.2□□□□□ -1.42
SLC1A1P43005 AP000620.1-201ENST00000527147 504 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.2□□□□□ -1.42
SLC1A1P43005 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.2□□□□□ -1.42
SLC1A1P43005 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.2□□□□□ -1.42
SLC1A1P43005 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.2□□□□□ -1.42
SLC1A1P43005 AL078601.3-201ENST00000573303 535 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.2□□□□□ -1.42
SLC1A1P43005 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.2□□□□□ -1.42
SLC1A1P43005 AL513327.3-201ENST00000602618 469 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.2□□□□□ -1.42
SLC1A1P43005 AC092681.3-201ENST00000609463 678 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.2□□□□□ -1.42
SLC1A1P43005 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SLC1A1P43005 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SLC1A1P43005 FAM27E2-201ENST00000619668 403 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 AC073488.3-201ENST00000631611 778 ntBASIC6.2□□□□□ -1.42
SLC1A1P43005 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SLC1A1P43005 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SLC1A1P43005 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.19□□□□□ -1.42
SLC1A1P43005 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.19□□□□□ -1.42
SLC1A1P43005 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SLC1A1P43005 AC009962.1-201ENST00000567327 3813 ntBASIC6.19□□□□□ -1.42
SLC1A1P43005 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SLC1A1P43005 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 CAP1P2-201ENST00000417455 1409 ntBASIC6.19□□□□□ -1.42
SLC1A1P43005 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms