Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.59□□□□□ -1.51
APOBEC1P41238 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
APOBEC1P41238 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
APOBEC1P41238 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
APOBEC1P41238 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
APOBEC1P41238 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
APOBEC1P41238 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.59□□□□□ -1.51
APOBEC1P41238 SSXP3-201ENST00000442971 1300 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
APOBEC1P41238 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
APOBEC1P41238 RNU6-697P-201ENST00000363348 107 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.59□□□□□ -1.51
APOBEC1P41238 AC098592.2-201ENST00000413158 265 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 ARAFP1-201ENST00000422172 605 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.59□□□□□ -1.51
APOBEC1P41238 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.59□□□□□ -1.51
APOBEC1P41238 H3F3BP1-201ENST00000440551 403 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.59□□□□□ -1.51
APOBEC1P41238 RPS15AP29-201ENST00000445539 400 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.59□□□□□ -1.51
APOBEC1P41238 RPL23AP60-201ENST00000450011 454 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.59□□□□□ -1.51
APOBEC1P41238 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.59□□□□□ -1.51
APOBEC1P41238 AC073594.1-201ENST00000462065 364 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 AC114728.1-201ENST00000488289 483 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 RPL12P30-201ENST00000488389 499 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 RPL9P15-201ENST00000491096 532 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 AP002453.1-201ENST00000492327 668 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.59□□□□□ -1.51
APOBEC1P41238 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
APOBEC1P41238 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.59□□□□□ -1.51
APOBEC1P41238 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.59□□□□□ -1.51
APOBEC1P41238 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.59□□□□□ -1.51
APOBEC1P41238 NPM1P5-201ENST00000557228 838 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.59□□□□□ -1.51
APOBEC1P41238 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.59□□□□□ -1.51
APOBEC1P41238 AL078601.3-201ENST00000573303 535 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.59□□□□□ -1.51
APOBEC1P41238 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.59□□□□□ -1.51
APOBEC1P41238 AL135999.3-201ENST00000610501 812 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.59□□□□□ -1.51
APOBEC1P41238 AL137067.2-201ENST00000621202 131 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 AL356490.1-201ENST00000623079 479 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.59□□□□□ -1.51
APOBEC1P41238 DNM1P47-203ENST00000571780 12667 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 AC007159.1-201ENST00000566529 4706 ntBASIC5.59□□□□□ -1.51
APOBEC1P41238 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.59□□□□□ -1.51
APOBEC1P41238 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
APOBEC1P41238 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.59□□□□□ -1.52
APOBEC1P41238 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
APOBEC1P41238 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
APOBEC1P41238 AL132656.3-201ENST00000606384 1595 ntBASIC5.59□□□□□ -1.52
APOBEC1P41238 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
APOBEC1P41238 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
APOBEC1P41238 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.58□□□□□ -1.52
APOBEC1P41238 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
APOBEC1P41238 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.58□□□□□ -1.52
APOBEC1P41238 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
APOBEC1P41238 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.58□□□□□ -1.52
APOBEC1P41238 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
APOBEC1P41238 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.58□□□□□ -1.52
APOBEC1P41238 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.58□□□□□ -1.52
APOBEC1P41238 RNA5SP156-201ENST00000410250 110 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.58□□□□□ -1.52
APOBEC1P41238 RPS7P8-201ENST00000418311 581 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.58□□□□□ -1.52
APOBEC1P41238 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.58□□□□□ -1.52
APOBEC1P41238 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 AL590004.3-202ENST00000445883 451 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AC104849.1-201ENST00000462623 405 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.58□□□□□ -1.52
APOBEC1P41238 RN7SL352P-201ENST00000466002 277 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.58□□□□□ -1.52
APOBEC1P41238 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 SNORA26.10-201ENST00000516427 141 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 Vault.2-201ENST00000516519 98 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.58□□□□□ -1.52
APOBEC1P41238 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.58□□□□□ -1.52
APOBEC1P41238 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.58□□□□□ -1.52
APOBEC1P41238 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.58□□□□□ -1.52
APOBEC1P41238 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.58□□□□□ -1.52
APOBEC1P41238 AC090079.2-201ENST00000575289 768 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AP005136.2-201ENST00000583253 1049 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
APOBEC1P41238 AC020916.2-201ENST00000591242 360 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.58□□□□□ -1.52
APOBEC1P41238 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.58□□□□□ -1.52
APOBEC1P41238 SMIM12P1-201ENST00000603004 274 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AC008555.7-201ENST00000605008 583 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AC073111.2-201ENST00000605657 1075 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 uc_338.29-201ENST00000615099 168 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AP002371.2-201ENST00000624450 503 ntBASIC5.58□□□□□ -1.52
APOBEC1P41238 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms