Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CTNNA1P35221 GTF2IP4-201ENST00000453092 2054 ntBASIC6.4□□□□□ -1.39
CTNNA1P35221 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CTNNA1P35221 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA1P35221 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA1P35221 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CTNNA1P35221 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA1P35221 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.39□□□□□ -1.39
CTNNA1P35221 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA1P35221 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CTNNA1P35221 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA1P35221 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.39□□□□□ -1.39
CTNNA1P35221 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA1P35221 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.39□□□□□ -1.39
CTNNA1P35221 RN7SKP166-201ENST00000410812 305 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.39□□□□□ -1.39
CTNNA1P35221 AL354868.1-201ENST00000417077 482 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.39□□□□□ -1.39
CTNNA1P35221 BX119904.3-201ENST00000428194 957 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 AC073410.1-201ENST00000435125 589 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 RPS3AP38-201ENST00000435889 763 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.39□□□□□ -1.39
CTNNA1P35221 WDR82P2-201ENST00000444540 928 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.39□□□□□ -1.39
CTNNA1P35221 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.39□□□□□ -1.39
CTNNA1P35221 AGGF1P3-201ENST00000493675 1213 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 RNA5SP96-201ENST00000516041 107 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 TDGP1-201ENST00000543961 1229 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.39□□□□□ -1.39
CTNNA1P35221 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.39□□□□□ -1.39
CTNNA1P35221 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.39□□□□□ -1.39
CTNNA1P35221 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.39□□□□□ -1.39
CTNNA1P35221 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.39□□□□□ -1.39
CTNNA1P35221 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.39□□□□□ -1.39
CTNNA1P35221 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 AL512413.1-201ENST00000606489 382 ntBASIC6.39□□□□□ -1.39
CTNNA1P35221 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.39□□□□□ -1.39
CTNNA1P35221 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA1P35221 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA1P35221 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.39□□□□□ -1.39
CTNNA1P35221 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.39□□□□□ -1.39
CTNNA1P35221 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
CTNNA1P35221 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA1P35221 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CTNNA1P35221 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTNNA1P35221 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA1P35221 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.38□□□□□ -1.39
CTNNA1P35221 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA1P35221 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CTNNA1P35221 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CTNNA1P35221 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA1P35221 RNA5SP485-201ENST00000365053 119 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.38□□□□□ -1.39
CTNNA1P35221 DPPA2P2-201ENST00000418220 897 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA1P35221 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.38□□□□□ -1.39
CTNNA1P35221 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA1P35221 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA1P35221 ARAFP2-201ENST00000440565 559 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AL445991.1-201ENST00000450381 475 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.38□□□□□ -1.39
CTNNA1P35221 RPL23AP40-201ENST00000487630 390 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 TRBV5-2-201ENST00000489095 273 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA1P35221 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA1P35221 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.38□□□□□ -1.39
CTNNA1P35221 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA1P35221 HNRNPRP2-201ENST00000528421 743 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AL121839.1-201ENST00000556233 1185 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 AC024267.2-201ENST00000582737 417 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 AP002884.5-201ENST00000595053 1132 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AC211486.4-201ENST00000621495 113 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CTNNA1P35221 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA1P35221 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA1P35221 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AC138907.8-201ENST00000623981 2256 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.38□□□□□ -1.39
CTNNA1P35221 AL121839.2-201ENST00000565058 6943 ntBASIC6.38□□□□□ -1.39
CTNNA1P35221 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTNNA1P35221 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA1P35221 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA1P35221 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA1P35221 AC020633.1-201ENST00000468439 2247 ntBASIC6.37□□□□□ -1.39
CTNNA1P35221 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA1P35221 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA1P35221 AL592429.1-201ENST00000403909 1473 ntBASIC6.37□□□□□ -1.39
CTNNA1P35221 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA1P35221 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTNNA1P35221 AL672167.2-201ENST00000377164 879 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms