Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RAC1P4-201ENST00000419413 579 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC12P31275 DLGAP5P1-201ENST00000430307 464 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 RPSAP32-201ENST00000432681 526 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC098826.1-201ENST00000433943 471 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 MTCO2P16-201ENST00000436962 677 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC005040.1-201ENST00000437783 482 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AL138878.2-201ENST00000440581 1241 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 RPS10P14-201ENST00000440748 502 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC027124.1-201ENST00000440852 466 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 PCNPP2-201ENST00000441651 455 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC12P31275 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.53□□□□□ -1.36
HOXC12P31275 SS18L2P1-201ENST00000445923 213 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC12P31275 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.53□□□□□ -1.36
HOXC12P31275 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC12P31275 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 HSPE1P22-201ENST00000456856 327 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 RN7SL251P-201ENST00000464175 297 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 CBX5P1-201ENST00000468470 561 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 RPL35AP19-201ENST00000469425 329 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 RN7SL836P-201ENST00000476140 296 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC12P31275 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 RPL7L1P7-201ENST00000509986 724 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC022296.2-201ENST00000512424 202 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.53□□□□□ -1.36
HOXC12P31275 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC12P31275 AC130366.1-201ENST00000526505 1192 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.53□□□□□ -1.36
HOXC12P31275 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC12P31275 AC138749.2-201ENST00000566048 167 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 AC007599.1-201ENST00000568688 1174 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC12P31275 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC12P31275 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 AL513548.2-201ENST00000602994 1207 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 U91328.4-201ENST00000608919 517 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC009163.6-201ENST00000612367 342 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 Z69908.1-201ENST00000622603 247 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 RPSAP68-201ENST00000625020 438 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 SNORA43.5-201ENST00000631270 138 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC233280.20-201ENST00000637412 416 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
HOXC12P31275 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
HOXC12P31275 SGO1P2-201ENST00000429458 1589 ntBASIC6.52□□□□□ -1.36
HOXC12P31275 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.52□□□□□ -1.36
HOXC12P31275 AL512662.1-201ENST00000624850 2251 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 SGO1P1-201ENST00000603525 1447 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 AC000367.1-201ENST00000452711 1766 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 AC090181.3-201ENST00000624777 1514 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 AC025040.2-201ENST00000558657 1852 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 RNU4-31P-201ENST00000384211 141 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 RPS3AP26-201ENST00000398259 784 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 GSTA8P-201ENST00000404253 637 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.52□□□□□ -1.37
HOXC12P31275 AL359633.1-201ENST00000421403 310 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AL034379.1-201ENST00000423216 253 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms