Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL354702.2-202ENST00000641481 890 ntBASIC7.85□□□□□ -1.15
LIG1P18858 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.85□□□□□ -1.15
LIG1P18858 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 SGO1P1-201ENST00000603525 1447 ntBASIC7.85□□□□□ -1.15
LIG1P18858 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.85□□□□□ -1.15
LIG1P18858 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
LIG1P18858 TNPO1P2-201ENST00000426249 2665 ntBASIC7.85□□□□□ -1.15
LIG1P18858 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.84□□□□□ -1.15
LIG1P18858 AC025263.3-201ENST00000622965 1396 ntBASIC7.84□□□□□ -1.15
LIG1P18858 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LIG1P18858 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.84□□□□□ -1.15
LIG1P18858 SUCLA2P2-201ENST00000417269 1309 ntBASIC7.84□□□□□ -1.15
LIG1P18858 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LIG1P18858 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
LIG1P18858 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.84□□□□□ -1.15
LIG1P18858 RNA5SP302-201ENST00000364896 100 ntBASIC7.84□□□□□ -1.15
LIG1P18858 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LIG1P18858 RNU6-207P-201ENST00000384137 107 ntBASIC7.84□□□□□ -1.15
LIG1P18858 SOD1P1-201ENST00000407803 440 ntBASIC7.84□□□□□ -1.15
LIG1P18858 AL713922.1-201ENST00000416477 747 ntBASIC7.84□□□□□ -1.15
LIG1P18858 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.84□□□□□ -1.15
LIG1P18858 CHCHD3P1-201ENST00000425516 676 ntBASIC7.84□□□□□ -1.15
LIG1P18858 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC7.84□□□□□ -1.15
LIG1P18858 MTND2P20-201ENST00000440805 661 ntBASIC7.84□□□□□ -1.15
LIG1P18858 SLAMF6P1-201ENST00000451067 602 ntBASIC7.84□□□□□ -1.15
LIG1P18858 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.84□□□□□ -1.15
LIG1P18858 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.84□□□□□ -1.15
LIG1P18858 RBMY2EP-202ENST00000456360 940 ntBASIC7.84□□□□□ -1.15
LIG1P18858 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC7.84□□□□□ -1.15
LIG1P18858 ATG12P2-201ENST00000456830 416 ntBASIC7.84□□□□□ -1.15
LIG1P18858 TREML3P-201ENST00000457327 501 ntBASIC7.84□□□□□ -1.15
LIG1P18858 RPSAP48-201ENST00000466509 889 ntBASIC7.84□□□□□ -1.15
LIG1P18858 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.84□□□□□ -1.15
LIG1P18858 AC091982.1-202ENST00000473923 343 ntBASIC7.84□□□□□ -1.15
LIG1P18858 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.84□□□□□ -1.15
LIG1P18858 OR5H3P-201ENST00000502817 919 ntBASIC7.84□□□□□ -1.15
LIG1P18858 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LIG1P18858 MTCYBP16-201ENST00000509187 1129 ntBASIC7.84□□□□□ -1.15
LIG1P18858 SNX18P25-201ENST00000510539 758 ntBASIC7.84□□□□□ -1.15
LIG1P18858 RNU5A-4P-201ENST00000516588 111 ntBASIC7.84□□□□□ -1.15
LIG1P18858 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.84□□□□□ -1.15
LIG1P18858 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC7.84□□□□□ -1.15
LIG1P18858 MIR4800-201ENST00000537353 80 ntBASIC7.84□□□□□ -1.15
LIG1P18858 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.84□□□□□ -1.15
LIG1P18858 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.84□□□□□ -1.15
LIG1P18858 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.84□□□□□ -1.15
LIG1P18858 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.84□□□□□ -1.15
LIG1P18858 AL031846.1-201ENST00000560933 314 ntBASIC7.84□□□□□ -1.15
LIG1P18858 AC126323.4-201ENST00000566935 234 ntBASIC7.84□□□□□ -1.15
LIG1P18858 MRPS35P3-201ENST00000603189 709 ntBASIC7.84□□□□□ -1.15
LIG1P18858 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.84□□□□□ -1.15
LIG1P18858 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.84□□□□□ -1.15
LIG1P18858 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.84□□□□□ -1.15
LIG1P18858 AL354718.1-201ENST00000619764 589 ntBASIC7.84□□□□□ -1.15
LIG1P18858 AC012629.3-201ENST00000623397 328 ntBASIC7.84□□□□□ -1.15
LIG1P18858 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.84□□□□□ -1.15
LIG1P18858 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
LIG1P18858 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LIG1P18858 AC012078.1-201ENST00000405035 1646 ntBASIC7.84□□□□□ -1.15
LIG1P18858 CDY19P-201ENST00000411668 1613 ntBASIC7.84□□□□□ -1.15
LIG1P18858 CDY18P-201ENST00000438294 1609 ntBASIC7.84□□□□□ -1.15
LIG1P18858 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.84□□□□□ -1.15
LIG1P18858 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.84□□□□□ -1.15
LIG1P18858 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.84□□□□□ -1.15
LIG1P18858 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
LIG1P18858 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.84□□□□□ -1.15
LIG1P18858 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.83□□□□□ -1.16
LIG1P18858 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.83□□□□□ -1.16
LIG1P18858 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 AL359694.2-201ENST00000567753 1615 ntBASIC7.83□□□□□ -1.16
LIG1P18858 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.83□□□□□ -1.16
LIG1P18858 MIR152-201ENST00000385212 87 ntBASIC7.83□□□□□ -1.16
LIG1P18858 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
LIG1P18858 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 RN7SKP148-201ENST00000410179 275 ntBASIC7.83□□□□□ -1.16
LIG1P18858 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.83□□□□□ -1.16
LIG1P18858 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 SETP9-201ENST00000423837 832 ntBASIC7.83□□□□□ -1.16
LIG1P18858 AC009362.1-201ENST00000427253 406 ntBASIC7.83□□□□□ -1.16
LIG1P18858 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.83□□□□□ -1.16
LIG1P18858 AC084290.1-201ENST00000434995 374 ntBASIC7.83□□□□□ -1.16
LIG1P18858 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 OSTCP2-201ENST00000437956 444 ntBASIC7.83□□□□□ -1.16
LIG1P18858 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 AC112184.1-201ENST00000505179 312 ntBASIC7.83□□□□□ -1.16
LIG1P18858 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 GOLGA5P1-201ENST00000507317 980 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms