Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 FTH1P2-201ENST00000466086 412 ntBASIC9.84□□□□□ -0.83
CFTRP13569 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC9.84□□□□□ -0.83
CFTRP13569 RN7SL591P-201ENST00000496150 292 ntBASIC9.84□□□□□ -0.83
CFTRP13569 AC093890.1-201ENST00000502554 540 ntBASIC9.84□□□□□ -0.83
CFTRP13569 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC9.84□□□□□ -0.83
CFTRP13569 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC9.84□□□□□ -0.83
CFTRP13569 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
CFTRP13569 AC100827.5-201ENST00000615883 426 ntBASIC9.84□□□□□ -0.83
CFTRP13569 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC9.84□□□□□ -0.83
CFTRP13569 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC9.84□□□□□ -0.83
CFTRP13569 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 HSPA8P18-201ENST00000439846 1928 ntBASIC9.84□□□□□ -0.83
CFTRP13569 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC9.84□□□□□ -0.83
CFTRP13569 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
CFTRP13569 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC9.83□□□□□ -0.84
CFTRP13569 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
CFTRP13569 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
CFTRP13569 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
CFTRP13569 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 AL391261.1-201ENST00000555712 1479 ntBASIC9.83□□□□□ -0.84
CFTRP13569 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC9.83□□□□□ -0.84
CFTRP13569 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
CFTRP13569 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
CFTRP13569 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC9.83□□□□□ -0.84
CFTRP13569 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC9.83□□□□□ -0.84
CFTRP13569 AL022319.1-201ENST00000458183 1167 ntBASIC9.83□□□□□ -0.84
CFTRP13569 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC9.83□□□□□ -0.84
CFTRP13569 AC073581.1-201ENST00000519036 575 ntBASIC9.83□□□□□ -0.84
CFTRP13569 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC9.83□□□□□ -0.84
CFTRP13569 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC9.83□□□□□ -0.84
CFTRP13569 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
CFTRP13569 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CFTRP13569 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CFTRP13569 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
CFTRP13569 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
CFTRP13569 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC9.82□□□□□ -0.84
CFTRP13569 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CFTRP13569 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
CFTRP13569 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.82□□□□□ -0.84
CFTRP13569 TNPO1P2-201ENST00000426249 2665 ntBASIC9.82□□□□□ -0.84
CFTRP13569 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CFTRP13569 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC9.82□□□□□ -0.84
CFTRP13569 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
CFTRP13569 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CFTRP13569 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC9.82□□□□□ -0.84
CFTRP13569 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC9.82□□□□□ -0.84
CFTRP13569 AZGP1P2-201ENST00000454506 345 ntBASIC9.82□□□□□ -0.84
CFTRP13569 AC007686.1-201ENST00000488511 463 ntBASIC9.82□□□□□ -0.84
CFTRP13569 RN7SL447P-201ENST00000494711 245 ntBASIC9.82□□□□□ -0.84
CFTRP13569 SNRPCP2-201ENST00000504370 475 ntBASIC9.82□□□□□ -0.84
CFTRP13569 GSTP1P1-201ENST00000548078 319 ntBASIC9.82□□□□□ -0.84
CFTRP13569 CLMN-206ENST00000556441 452 ntTSL 5 BASIC9.82□□□□□ -0.84
CFTRP13569 NMNAT1P5-201ENST00000559657 841 ntBASIC9.82□□□□□ -0.84
CFTRP13569 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC9.82□□□□□ -0.84
CFTRP13569 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC9.82□□□□□ -0.84
CFTRP13569 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC9.82□□□□□ -0.84
CFTRP13569 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC9.82□□□□□ -0.84
CFTRP13569 uc_338.18-201ENST00000615451 175 ntBASIC9.82□□□□□ -0.84
CFTRP13569 WBP1LP8-201ENST00000617401 327 ntBASIC9.82□□□□□ -0.84
CFTRP13569 AC091953.3-201ENST00000623220 236 ntBASIC9.82□□□□□ -0.84
CFTRP13569 AP002799.1-201ENST00000623552 423 ntBASIC9.82□□□□□ -0.84
CFTRP13569 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CFTRP13569 MFSD8-219ENST00000641228 2559 ntBASIC9.82□□□□□ -0.84
CFTRP13569 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
CFTRP13569 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC9.82□□□□□ -0.84
CFTRP13569 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CFTRP13569 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
CFTRP13569 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
CFTRP13569 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
CFTRP13569 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
CFTRP13569 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC9.81□□□□□ -0.84
CFTRP13569 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CFTRP13569 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
CFTRP13569 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC9.81□□□□□ -0.84
CFTRP13569 MTHFD2P5-201ENST00000320415 844 ntBASIC9.81□□□□□ -0.84
CFTRP13569 RN7SKP104-201ENST00000362605 328 ntBASIC9.81□□□□□ -0.84
CFTRP13569 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
CFTRP13569 U3.36-201ENST00000408418 213 ntBASIC9.81□□□□□ -0.84
CFTRP13569 AL133325.1-201ENST00000421090 382 ntBASIC9.81□□□□□ -0.84
CFTRP13569 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC9.81□□□□□ -0.84
CFTRP13569 AL772161.1-201ENST00000439130 476 ntBASIC9.81□□□□□ -0.84
CFTRP13569 DNAJB5P1-201ENST00000454004 806 ntBASIC9.81□□□□□ -0.84
CFTRP13569 ACA64.4-201ENST00000459070 127 ntBASIC9.81□□□□□ -0.84
CFTRP13569 AC105384.2-201ENST00000508433 640 ntBASIC9.81□□□□□ -0.84
CFTRP13569 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms