Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TOP1P11387 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
TOP1P11387 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TOP1P11387 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.06□□□□□ -1.28
TOP1P11387 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
TOP1P11387 AC139426.3-201ENST00000605648 2059 ntBASIC7.05□□□□□ -1.28
TOP1P11387 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.05□□□□□ -1.28
TOP1P11387 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.05□□□□□ -1.28
TOP1P11387 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
TOP1P11387 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
TOP1P11387 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
TOP1P11387 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TOP1P11387 AL049634.1-201ENST00000453770 1720 ntBASIC7.05□□□□□ -1.28
TOP1P11387 AC016583.1-201ENST00000624221 2431 ntBASIC7.05□□□□□ -1.28
TOP1P11387 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
TOP1P11387 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TOP1P11387 OR7E25P-201ENST00000344844 931 ntBASIC7.05□□□□□ -1.28
TOP1P11387 OR10R3P-201ENST00000361688 942 ntBASIC7.05□□□□□ -1.28
TOP1P11387 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TOP1P11387 RNU6-316P-201ENST00000391027 107 ntBASIC7.05□□□□□ -1.28
TOP1P11387 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.05□□□□□ -1.28
TOP1P11387 HMGN1P20-201ENST00000411849 300 ntBASIC7.05□□□□□ -1.28
TOP1P11387 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.05□□□□□ -1.28
TOP1P11387 GEMIN2P1-201ENST00000454246 752 ntBASIC7.05□□□□□ -1.28
TOP1P11387 HLA-DPA3-207ENST00000454398 229 ntBASIC7.05□□□□□ -1.28
TOP1P11387 RPL7L1P3-201ENST00000455249 689 ntBASIC7.05□□□□□ -1.28
TOP1P11387 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.05□□□□□ -1.28
TOP1P11387 RNA5SP438-201ENST00000516561 112 ntBASIC7.05□□□□□ -1.28
TOP1P11387 AC068305.2-201ENST00000550567 1205 ntBASIC7.05□□□□□ -1.28
TOP1P11387 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.05□□□□□ -1.28
TOP1P11387 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.05□□□□□ -1.28
TOP1P11387 AL136131.3-201ENST00000607600 188 ntBASIC7.05□□□□□ -1.28
TOP1P11387 AC015982.1-201ENST00000608113 465 ntBASIC7.05□□□□□ -1.28
TOP1P11387 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.05□□□□□ -1.28
TOP1P11387 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TOP1P11387 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.05□□□□□ -1.28
TOP1P11387 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TOP1P11387 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TOP1P11387 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.05□□□□□ -1.28
TOP1P11387 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.05□□□□□ -1.28
TOP1P11387 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TOP1P11387 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
TOP1P11387 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TOP1P11387 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.04□□□□□ -1.28
TOP1P11387 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TOP1P11387 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TOP1P11387 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TOP1P11387 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TOP1P11387 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
TOP1P11387 LYPLA1P3-201ENST00000402650 695 ntBASIC7.04□□□□□ -1.28
TOP1P11387 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.04□□□□□ -1.28
TOP1P11387 AL354890.1-201ENST00000413730 346 ntBASIC7.04□□□□□ -1.28
TOP1P11387 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.04□□□□□ -1.28
TOP1P11387 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TOP1P11387 CDY8P-201ENST00000428380 1279 ntBASIC7.04□□□□□ -1.28
TOP1P11387 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.04□□□□□ -1.28
TOP1P11387 CDY20P-201ENST00000447528 1279 ntBASIC7.04□□□□□ -1.28
TOP1P11387 AC023245.1-201ENST00000468501 517 ntBASIC7.04□□□□□ -1.28
TOP1P11387 AC006499.4-201ENST00000510947 694 ntBASIC7.04□□□□□ -1.28
TOP1P11387 CYP4F27P-201ENST00000514557 494 ntBASIC7.04□□□□□ -1.28
TOP1P11387 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.04□□□□□ -1.28
TOP1P11387 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.04□□□□□ -1.28
TOP1P11387 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.04□□□□□ -1.28
TOP1P11387 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.04□□□□□ -1.28
TOP1P11387 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
TOP1P11387 AC021422.1-201ENST00000621212 473 ntBASIC7.04□□□□□ -1.28
TOP1P11387 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TOP1P11387 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TOP1P11387 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TOP1P11387 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TOP1P11387 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TOP1P11387 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.04□□□□□ -1.28
TOP1P11387 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.04□□□□□ -1.28
TOP1P11387 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
TOP1P11387 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
TOP1P11387 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
TOP1P11387 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TOP1P11387 AC006600.2-201ENST00000624834 2506 ntBASIC7.03□□□□□ -1.28
TOP1P11387 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TOP1P11387 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TOP1P11387 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.03□□□□□ -1.28
TOP1P11387 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
TOP1P11387 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.03□□□□□ -1.28
TOP1P11387 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
TOP1P11387 TMSB4XP2-201ENST00000335179 210 ntBASIC7.03□□□□□ -1.28
TOP1P11387 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.03□□□□□ -1.28
TOP1P11387 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
TOP1P11387 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.03□□□□□ -1.28
TOP1P11387 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.03□□□□□ -1.28
TOP1P11387 BX284632.2-201ENST00000421091 399 ntBASIC7.03□□□□□ -1.28
TOP1P11387 NMD3P2-201ENST00000421815 761 ntBASIC7.03□□□□□ -1.28
TOP1P11387 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.03□□□□□ -1.28
TOP1P11387 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.03□□□□□ -1.28
TOP1P11387 NDUFS5P5-201ENST00000437256 321 ntBASIC7.03□□□□□ -1.28
TOP1P11387 BX679664.2-201ENST00000439282 283 ntBASIC7.03□□□□□ -1.28
TOP1P11387 AL512605.1-202ENST00000441919 381 ntBASIC7.03□□□□□ -1.28
TOP1P11387 AL359955.2-201ENST00000445380 353 ntBASIC7.03□□□□□ -1.28
TOP1P11387 AL355032.1-201ENST00000472981 438 ntBASIC7.03□□□□□ -1.28
TOP1P11387 RPL23AP40-201ENST00000487630 390 ntBASIC7.03□□□□□ -1.28
TOP1P11387 AC090568.1-201ENST00000509499 856 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms