Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 CLUHP10-201ENST00000631979 980 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 AC145138.1-201ENST00000512908 2851 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 ASAP1-IT2-201ENST00000626977 2031 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PDGFAP04085 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PDGFAP04085 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 AC011592.1-201ENST00000624647 3634 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PDGFAP04085 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 OR56A4-201ENST00000330728 1209 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.25□□□□□ -1.25
PDGFAP04085 SNORA30-201ENST00000384028 129 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 NCSTNP1-201ENST00000406229 144 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.25□□□□□ -1.25
PDGFAP04085 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC122718.1-201ENST00000439448 744 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 ARAFP2-201ENST00000440565 559 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.25□□□□□ -1.25
PDGFAP04085 AL671855.1-201ENST00000446875 1203 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 EEF1E1P1-201ENST00000446998 430 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 WASF1P1-201ENST00000447560 1131 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 OR6C5P-201ENST00000452388 923 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 DNAJC19P8-201ENST00000452887 259 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 PSMC1P13-201ENST00000458195 985 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 FAM133DP-201ENST00000464802 691 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 RPL7AP30-201ENST00000482859 796 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 RPS7P6-201ENST00000485777 579 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 FCF1P3-201ENST00000496394 590 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 LINC01085-203ENST00000511195 326 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC7.25□□□□□ -1.25
PDGFAP04085 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 RN7SKP244-201ENST00000516513 307 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 AC091982.1-201ENST00000518134 520 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC7.25□□□□□ -1.25
PDGFAP04085 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC118273.2-201ENST00000532092 465 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.25□□□□□ -1.25
PDGFAP04085 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC092868.1-201ENST00000557949 802 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC125494.2-201ENST00000602431 657 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 AL353621.2-201ENST00000605340 133 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 AC016727.1-205ENST00000605437 569 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 AL589743.7-201ENST00000612637 233 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7.25□□□□□ -1.25
PDGFAP04085 AL445670.1-201ENST00000618889 801 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 AL589666.2-201ENST00000624603 618 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PDGFAP04085 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.25□□□□□ -1.25
PDGFAP04085 AC025040.2-201ENST00000558657 1852 ntBASIC7.25□□□□□ -1.25
PDGFAP04085 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.25□□□□□ -1.25
PDGFAP04085 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
PDGFAP04085 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.25□□□□□ -1.25
PDGFAP04085 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PDGFAP04085 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.25□□□□□ -1.25
PDGFAP04085 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms