Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.58□□□□□ -1.36
CHRNA1P02708 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.58□□□□□ -1.36
CHRNA1P02708 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CHRNA1P02708 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.58□□□□□ -1.36
CHRNA1P02708 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CHRNA1P02708 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CHRNA1P02708 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.58□□□□□ -1.36
CHRNA1P02708 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CHRNA1P02708 PDZK1P1-202ENST00000425209 1350 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.57□□□□□ -1.36
CHRNA1P02708 AC011369.2-201ENST00000624423 1567 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHRNA1P02708 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHRNA1P02708 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.57□□□□□ -1.36
CHRNA1P02708 CCAT2-201ENST00000630920 1752 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHRNA1P02708 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.57□□□□□ -1.36
CHRNA1P02708 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.57□□□□□ -1.36
CHRNA1P02708 AC016739.1-201ENST00000405359 345 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.57□□□□□ -1.36
CHRNA1P02708 BMS1P13-201ENST00000417301 885 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHRNA1P02708 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.57□□□□□ -1.36
CHRNA1P02708 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.57□□□□□ -1.36
CHRNA1P02708 UBE2V2P4-201ENST00000447495 259 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 RPSAP37-201ENST00000470913 821 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 AC008629.2-201ENST00000503783 483 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.57□□□□□ -1.36
CHRNA1P02708 RNA5SP362-201ENST00000516048 118 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.57□□□□□ -1.36
CHRNA1P02708 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.57□□□□□ -1.36
CHRNA1P02708 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.57□□□□□ -1.36
CHRNA1P02708 AL049840.6-201ENST00000604583 345 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 FAM27E4-201ENST00000605259 342 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 AC018659.2-201ENST00000624690 715 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 AC003992.1-201ENST00000635364 557 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.57□□□□□ -1.36
CHRNA1P02708 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CHRNA1P02708 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHRNA1P02708 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHRNA1P02708 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.57□□□□□ -1.36
CHRNA1P02708 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHRNA1P02708 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.57□□□□□ -1.36
CHRNA1P02708 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHRNA1P02708 AC092724.1-201ENST00000624623 3397 ntBASIC6.57□□□□□ -1.36
CHRNA1P02708 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.56□□□□□ -1.36
CHRNA1P02708 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.56□□□□□ -1.36
CHRNA1P02708 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.56□□□□□ -1.36
CHRNA1P02708 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.56□□□□□ -1.36
CHRNA1P02708 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.56□□□□□ -1.36
CHRNA1P02708 AC092692.1-201ENST00000623625 2595 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.56□□□□□ -1.36
CHRNA1P02708 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CHRNA1P02708 OR10R3P-201ENST00000361688 942 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.56□□□□□ -1.36
CHRNA1P02708 TRGV5P-201ENST00000419915 354 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 NMD3P2-201ENST00000421815 761 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.56□□□□□ -1.36
CHRNA1P02708 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.56□□□□□ -1.36
CHRNA1P02708 AC126120.1-201ENST00000431082 470 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.56□□□□□ -1.36
CHRNA1P02708 LYPLA1P1-201ENST00000434514 622 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.56□□□□□ -1.36
CHRNA1P02708 RPL23AP60-201ENST00000450011 454 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.56□□□□□ -1.36
CHRNA1P02708 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.56□□□□□ -1.36
CHRNA1P02708 ATP5LP3-201ENST00000514223 304 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 AC073581.1-201ENST00000519036 575 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 AP004607.6-201ENST00000525033 1202 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.56□□□□□ -1.36
CHRNA1P02708 AC091078.2-201ENST00000557145 559 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 AP001496.3-201ENST00000580230 913 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.56□□□□□ -1.36
CHRNA1P02708 AC119403.2-201ENST00000590960 598 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 MIR6826-201ENST00000617808 98 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 AC009120.7-201ENST00000623452 780 ntBASIC6.56□□□□□ -1.36
CHRNA1P02708 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.56□□□□□ -1.36
CHRNA1P02708 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CHRNA1P02708 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.56□□□□□ -1.36
CHRNA1P02708 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHRNA1P02708 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
CHRNA1P02708 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms