Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC7.1□□□□□ -1.27
COL1A1P02452 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.1□□□□□ -1.27
COL1A1P02452 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.1□□□□□ -1.27
COL1A1P02452 AL139099.4-201ENST00000614802 114 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.1□□□□□ -1.27
COL1A1P02452 AL035661.1-201ENST00000620459 1144 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.1□□□□□ -1.27
COL1A1P02452 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.1□□□□□ -1.27
COL1A1P02452 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 AC009831.5-201ENST00000624000 3189 ntBASIC7.1□□□□□ -1.27
COL1A1P02452 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.1□□□□□ -1.27
COL1A1P02452 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL1A1P02452 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
COL1A1P02452 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
COL1A1P02452 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
COL1A1P02452 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL1A1P02452 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL1A1P02452 UG0898H09-202ENST00000623646 7040 ntBASIC7.09□□□□□ -1.27
COL1A1P02452 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL1A1P02452 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
COL1A1P02452 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL1A1P02452 MYL6P5-201ENST00000412707 459 ntBASIC7.09□□□□□ -1.27
COL1A1P02452 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.09□□□□□ -1.27
COL1A1P02452 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL1A1P02452 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.09□□□□□ -1.27
COL1A1P02452 AC015983.1-201ENST00000441577 373 ntBASIC7.09□□□□□ -1.27
COL1A1P02452 ACA64.4-201ENST00000459070 127 ntBASIC7.09□□□□□ -1.27
COL1A1P02452 RPL23AP40-201ENST00000487630 390 ntBASIC7.09□□□□□ -1.27
COL1A1P02452 AC009120.1-201ENST00000493458 473 ntBASIC7.09□□□□□ -1.27
COL1A1P02452 BX510359.5-201ENST00000515651 304 ntBASIC7.09□□□□□ -1.27
COL1A1P02452 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.09□□□□□ -1.27
COL1A1P02452 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL1A1P02452 MIR4700-201ENST00000578311 74 ntBASIC7.09□□□□□ -1.27
COL1A1P02452 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.09□□□□□ -1.27
COL1A1P02452 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.09□□□□□ -1.27
COL1A1P02452 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.09□□□□□ -1.27
COL1A1P02452 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL1A1P02452 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL1A1P02452 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL1A1P02452 OLMALINC-203ENST00000641087 3779 ntBASIC7.09□□□□□ -1.28
COL1A1P02452 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL1A1P02452 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL1A1P02452 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL1A1P02452 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.08□□□□□ -1.28
COL1A1P02452 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
COL1A1P02452 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL1A1P02452 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL1A1P02452 AL589993.1-201ENST00000407450 2524 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.08□□□□□ -1.28
COL1A1P02452 RNU4-34P-201ENST00000410431 124 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.08□□□□□ -1.28
COL1A1P02452 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL1A1P02452 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.08□□□□□ -1.28
COL1A1P02452 AL022331.1-201ENST00000429025 477 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 FMO7P-201ENST00000436045 768 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 Z84478.1-201ENST00000438230 1219 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 CUBNP2-201ENST00000443534 1139 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 AC022215.1-201ENST00000481770 362 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.08□□□□□ -1.28
COL1A1P02452 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.08□□□□□ -1.28
COL1A1P02452 AC108043.1-201ENST00000512696 574 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 CYP4F27P-201ENST00000514557 494 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 MRPS16P1-201ENST00000523462 412 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.08□□□□□ -1.28
COL1A1P02452 HSPE1P2-201ENST00000554777 306 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.08□□□□□ -1.28
COL1A1P02452 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.08□□□□□ -1.28
COL1A1P02452 AC145423.1-201ENST00000605712 336 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.08□□□□□ -1.28
COL1A1P02452 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.08□□□□□ -1.28
COL1A1P02452 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
COL1A1P02452 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.08□□□□□ -1.28
COL1A1P02452 AC130304.1-201ENST00000622942 2385 ntBASIC7.08□□□□□ -1.28
COL1A1P02452 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL1A1P02452 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.08□□□□□ -1.28
COL1A1P02452 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
COL1A1P02452 AL355377.1-201ENST00000621125 1653 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL1A1P02452 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.07□□□□□ -1.28
COL1A1P02452 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL1A1P02452 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL1A1P02452 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL1A1P02452 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.07□□□□□ -1.28
COL1A1P02452 RNA5SP234-201ENST00000363916 119 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 SNORA74A-201ENST00000364089 198 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL1A1P02452 DPPA2P3-201ENST00000411853 655 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 HMGA1P8-201ENST00000414130 321 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.07□□□□□ -1.28
COL1A1P02452 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.07□□□□□ -1.28
COL1A1P02452 AC016027.5-201ENST00000427227 210 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 CYCSP51-201ENST00000443545 318 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 AC007386.1-201ENST00000455212 582 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 RN7SL352P-201ENST00000466002 277 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 RPS3AP15-201ENST00000483874 781 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 RPL32P33-201ENST00000487023 394 ntBASIC7.07□□□□□ -1.28
COL1A1P02452 AC109481.1-201ENST00000509173 282 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms