Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RPS23P9-201ENST00000448848 438 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC018639.1-201ENST00000492994 442 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 NPM1P21-201ENST00000513394 762 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 SCARNA11.1-201ENST00000516918 132 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC130366.1-201ENST00000526505 1192 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 OR8A2P-201ENST00000528631 952 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AP004607.5-201ENST00000532034 217 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 SLC25A51P2-201ENST00000535708 889 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL121594.2-201ENST00000541658 472 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC068408.1-201ENST00000577406 1144 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC008507.3-201ENST00000585753 472 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL589863.1-201ENST00000595383 631 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC245052.7-201ENST00000601161 359 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL591222.2-201ENST00000604443 754 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC006453.3-201ENST00000635891 377 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 OR9K1P-202ENST00000641111 3217 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC009220.2-201ENST00000489759 1751 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 RBPJP6-201ENST00000411556 1431 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC130304.1-201ENST00000622942 2385 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC004023.1-201ENST00000561473 1744 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 RNA5SP152-201ENST00000365184 110 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 MIR431-201ENST00000385266 114 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 LDHAP5-201ENST00000394996 622 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 NPM1P38-201ENST00000403835 865 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 RPL18AP14-201ENST00000417685 526 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 RPSAP65-201ENST00000429660 595 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC012123.2-201ENST00000485809 248 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AL079303.1-201ENST00000486611 463 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 USP9YP2-201ENST00000504503 1000 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC111000.5-201ENST00000506559 1178 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 USP9YP1-201ENST00000513521 1002 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 FTH1P11-201ENST00000517577 551 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 TMEM97P2-201ENST00000517841 403 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 NPIPB14P-203ENST00000532298 987 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AP002004.1-206ENST00000532441 876 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC090424.1-201ENST00000535243 736 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC007068.2-201ENST00000543168 395 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 NDUFB9P1-201ENST00000604683 510 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 HNRNPA3P9-201ENST00000604913 979 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms